Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccbe1Q3MI99 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.5□□□□□ -0.41
Ccbe1Q3MI99 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ccbe1Q3MI99 Gm13464-201ENSMUST00000119418 935 ntBASIC12.5□□□□□ -0.41
Ccbe1Q3MI99 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC12.5□□□□□ -0.41
Ccbe1Q3MI99 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC12.5□□□□□ -0.41
Ccbe1Q3MI99 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Ccbe1Q3MI99 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC12.5□□□□□ -0.41
Ccbe1Q3MI99 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ccbe1Q3MI99 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ccbe1Q3MI99 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Ccbe1Q3MI99 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC12.5□□□□□ -0.41
Ccbe1Q3MI99 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccbe1Q3MI99 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.5□□□□□ -0.41
Ccbe1Q3MI99 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccbe1Q3MI99 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccbe1Q3MI99 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccbe1Q3MI99 Gm9252-201ENSMUST00000172364 1602 ntBASIC12.5□□□□□ -0.41
Ccbe1Q3MI99 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccbe1Q3MI99 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccbe1Q3MI99 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccbe1Q3MI99 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Ccbe1Q3MI99 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccbe1Q3MI99 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccbe1Q3MI99 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccbe1Q3MI99 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccbe1Q3MI99 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Ccbe1Q3MI99 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccbe1Q3MI99 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Ccbe1Q3MI99 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccbe1Q3MI99 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ccbe1Q3MI99 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccbe1Q3MI99 Gm43014-201ENSMUST00000198568 2443 ntBASIC12.49□□□□□ -0.41
Ccbe1Q3MI99 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccbe1Q3MI99 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Ccbe1Q3MI99 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.49□□□□□ -0.41
Ccbe1Q3MI99 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ccbe1Q3MI99 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccbe1Q3MI99 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccbe1Q3MI99 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ccbe1Q3MI99 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccbe1Q3MI99 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Ccbe1Q3MI99 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ccbe1Q3MI99 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccbe1Q3MI99 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC12.49□□□□□ -0.41
Ccbe1Q3MI99 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccbe1Q3MI99 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccbe1Q3MI99 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccbe1Q3MI99 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ccbe1Q3MI99 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Ccbe1Q3MI99 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccbe1Q3MI99 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccbe1Q3MI99 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccbe1Q3MI99 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccbe1Q3MI99 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccbe1Q3MI99 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccbe1Q3MI99 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccbe1Q3MI99 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.49□□□□□ -0.41
Ccbe1Q3MI99 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccbe1Q3MI99 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccbe1Q3MI99 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccbe1Q3MI99 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccbe1Q3MI99 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccbe1Q3MI99 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC12.48□□□□□ -0.41
Ccbe1Q3MI99 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.48□□□□□ -0.41
Ccbe1Q3MI99 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccbe1Q3MI99 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccbe1Q3MI99 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccbe1Q3MI99 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccbe1Q3MI99 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Ccbe1Q3MI99 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccbe1Q3MI99 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccbe1Q3MI99 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccbe1Q3MI99 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccbe1Q3MI99 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccbe1Q3MI99 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccbe1Q3MI99 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccbe1Q3MI99 Gm13312-201ENSMUST00000119631 718 ntBASIC12.48□□□□□ -0.41
Ccbe1Q3MI99 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccbe1Q3MI99 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccbe1Q3MI99 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccbe1Q3MI99 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC12.48□□□□□ -0.41
Ccbe1Q3MI99 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccbe1Q3MI99 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccbe1Q3MI99 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccbe1Q3MI99 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccbe1Q3MI99 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccbe1Q3MI99 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccbe1Q3MI99 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccbe1Q3MI99 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccbe1Q3MI99 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Ccbe1Q3MI99 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Ccbe1Q3MI99 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccbe1Q3MI99 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Ccbe1Q3MI99 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccbe1Q3MI99 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccbe1Q3MI99 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Ccbe1Q3MI99 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.48□□□□□ -0.41
Ccbe1Q3MI99 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccbe1Q3MI99 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms