Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Q3KNL4 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.6□□□□□ -0.23
Q3KNL4 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Q3KNL4 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Q3KNL4 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Q3KNL4 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Q3KNL4 Gm13332-201ENSMUST00000120451 1398 ntBASIC13.59□□□□□ -0.23
Q3KNL4 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Q3KNL4 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Q3KNL4 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Q3KNL4 Gm45751-201ENSMUST00000210185 1573 ntBASIC13.59□□□□□ -0.23
Q3KNL4 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Q3KNL4 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.59□□□□□ -0.23
Q3KNL4 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC13.59□□□□□ -0.23
Q3KNL4 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Q3KNL4 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.59□□□□□ -0.23
Q3KNL4 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC13.59□□□□□ -0.23
Q3KNL4 Gm9824-201ENSMUST00000178707 561 ntBASIC13.59□□□□□ -0.23
Q3KNL4 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Q3KNL4 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13.59□□□□□ -0.23
Q3KNL4 AW822252-206ENSMUST00000208904 237 ntBASIC13.59□□□□□ -0.23
Q3KNL4 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Q3KNL4 Ndufaf2-202ENSMUST00000223734 556 ntBASIC13.59□□□□□ -0.23
Q3KNL4 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.59□□□□□ -0.23
Q3KNL4 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.59□□□□□ -0.23
Q3KNL4 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Q3KNL4 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
Q3KNL4 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Q3KNL4 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Q3KNL4 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Q3KNL4 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Q3KNL4 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Q3KNL4 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.59□□□□□ -0.23
Q3KNL4 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Q3KNL4 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Q3KNL4 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Q3KNL4 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Q3KNL4 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Q3KNL4 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Q3KNL4 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Q3KNL4 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Q3KNL4 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Q3KNL4 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Q3KNL4 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Q3KNL4 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Q3KNL4 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Q3KNL4 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Q3KNL4 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Q3KNL4 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
Q3KNL4 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Q3KNL4 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Q3KNL4 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Q3KNL4 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Q3KNL4 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Q3KNL4 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Q3KNL4 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Q3KNL4 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
Q3KNL4 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Q3KNL4 AC131710.1-201ENSMUST00000228336 990 ntBASIC13.58□□□□□ -0.24
Q3KNL4 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Q3KNL4 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Q3KNL4 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
Q3KNL4 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Q3KNL4 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.58□□□□□ -0.24
Q3KNL4 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.58□□□□□ -0.24
Q3KNL4 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Q3KNL4 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.58□□□□□ -0.24
Q3KNL4 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Q3KNL4 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC13.58□□□□□ -0.24
Q3KNL4 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.58□□□□□ -0.24
Q3KNL4 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Q3KNL4 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Q3KNL4 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Q3KNL4 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Q3KNL4 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Q3KNL4 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Q3KNL4 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Q3KNL4 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Q3KNL4 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Q3KNL4 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Q3KNL4 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Q3KNL4 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Q3KNL4 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC13.57□□□□□ -0.24
Q3KNL4 Gm13365-201ENSMUST00000121188 973 ntBASIC13.57□□□□□ -0.24
Q3KNL4 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.57□□□□□ -0.24
Q3KNL4 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Q3KNL4 Gm27525-201ENSMUST00000184465 107 ntBASIC13.57□□□□□ -0.24
Q3KNL4 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC13.57□□□□□ -0.24
Q3KNL4 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Q3KNL4 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Q3KNL4 Gm45453-201ENSMUST00000211758 853 ntBASIC13.57□□□□□ -0.24
Q3KNL4 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.57□□□□□ -0.24
Q3KNL4 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Q3KNL4 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Q3KNL4 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Q3KNL4 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Q3KNL4 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Q3KNL4 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Q3KNL4 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Q3KNL4 BC001981-202ENSMUST00000191393 1545 ntBASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms