Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trim63Q38HM4 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC11.36□□□□□ -0.59
Trim63Q38HM4 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC11.36□□□□□ -0.59
Trim63Q38HM4 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC11.36□□□□□ -0.59
Trim63Q38HM4 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim63Q38HM4 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim63Q38HM4 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trim63Q38HM4 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trim63Q38HM4 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim63Q38HM4 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim63Q38HM4 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC11.36□□□□□ -0.59
Trim63Q38HM4 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim63Q38HM4 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim63Q38HM4 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim63Q38HM4 Gm6157-201ENSMUST00000199935 1897 ntBASIC11.36□□□□□ -0.59
Trim63Q38HM4 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim63Q38HM4 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim63Q38HM4 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC11.36□□□□□ -0.59
Trim63Q38HM4 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Trim63Q38HM4 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim63Q38HM4 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim63Q38HM4 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC11.36□□□□□ -0.59
Trim63Q38HM4 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim63Q38HM4 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim63Q38HM4 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim63Q38HM4 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim63Q38HM4 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim63Q38HM4 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC11.35□□□□□ -0.59
Trim63Q38HM4 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trim63Q38HM4 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim63Q38HM4 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim63Q38HM4 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trim63Q38HM4 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trim63Q38HM4 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim63Q38HM4 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim63Q38HM4 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC11.35□□□□□ -0.59
Trim63Q38HM4 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC11.35□□□□□ -0.59
Trim63Q38HM4 Gm13181-201ENSMUST00000120117 1069 ntBASIC11.35□□□□□ -0.59
Trim63Q38HM4 Gm27275-201ENSMUST00000184318 272 ntBASIC11.35□□□□□ -0.59
Trim63Q38HM4 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trim63Q38HM4 Gm19164-201ENSMUST00000210667 640 ntBASIC11.35□□□□□ -0.59
Trim63Q38HM4 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC11.35□□□□□ -0.59
Trim63Q38HM4 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim63Q38HM4 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trim63Q38HM4 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim63Q38HM4 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.35□□□□□ -0.59
Trim63Q38HM4 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.35□□□□□ -0.59
Trim63Q38HM4 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Trim63Q38HM4 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim63Q38HM4 Gm17435-202ENSMUST00000212699 1998 ntBASIC11.35□□□□□ -0.59
Trim63Q38HM4 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim63Q38HM4 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Trim63Q38HM4 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trim63Q38HM4 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim63Q38HM4 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Trim63Q38HM4 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim63Q38HM4 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim63Q38HM4 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Trim63Q38HM4 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.35□□□□□ -0.59
Trim63Q38HM4 Gm15271-201ENSMUST00000134627 2110 ntTSL 5 BASIC11.35□□□□□ -0.59
Trim63Q38HM4 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
Trim63Q38HM4 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim63Q38HM4 AC211878.3-201ENSMUST00000222629 2018 ntBASIC11.35□□□□□ -0.59
Trim63Q38HM4 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Trim63Q38HM4 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim63Q38HM4 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Trim63Q38HM4 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Trim63Q38HM4 Nrn1-203ENSMUST00000223611 1443 ntBASIC11.35□□□□□ -0.59
Trim63Q38HM4 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim63Q38HM4 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Trim63Q38HM4 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim63Q38HM4 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Trim63Q38HM4 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trim63Q38HM4 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Trim63Q38HM4 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trim63Q38HM4 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim63Q38HM4 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trim63Q38HM4 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Trim63Q38HM4 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim63Q38HM4 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim63Q38HM4 Nudt18-203ENSMUST00000228768 1578 ntBASIC11.34□□□□□ -0.59
Trim63Q38HM4 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim63Q38HM4 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim63Q38HM4 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trim63Q38HM4 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim63Q38HM4 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trim63Q38HM4 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim63Q38HM4 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trim63Q38HM4 Zmynd8-205ENSMUST00000109266 5072 ntAPPRIS P4 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim63Q38HM4 Zmynd8-221ENSMUST00000177633 5093 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim63Q38HM4 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC11.34□□□□□ -0.59
Trim63Q38HM4 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Trim63Q38HM4 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trim63Q38HM4 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trim63Q38HM4 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trim63Q38HM4 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC11.34□□□□□ -0.59
Trim63Q38HM4 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC11.34□□□□□ -0.59
Trim63Q38HM4 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trim63Q38HM4 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Trim63Q38HM4 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms