Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Smn1P97801 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC11.85□□□□□ -0.51
Smn1P97801 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smn1P97801 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smn1P97801 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smn1P97801 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC11.85□□□□□ -0.51
Smn1P97801 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smn1P97801 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smn1P97801 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smn1P97801 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC11.85□□□□□ -0.51
Smn1P97801 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smn1P97801 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smn1P97801 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Smn1P97801 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smn1P97801 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Smn1P97801 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Smn1P97801 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smn1P97801 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smn1P97801 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smn1P97801 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smn1P97801 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC11.84□□□□□ -0.51
Smn1P97801 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smn1P97801 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smn1P97801 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smn1P97801 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Smn1P97801 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smn1P97801 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smn1P97801 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smn1P97801 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smn1P97801 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smn1P97801 Gm37861-201ENSMUST00000193534 2869 ntBASIC11.84□□□□□ -0.51
Smn1P97801 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC11.84□□□□□ -0.51
Smn1P97801 Gm14140-201ENSMUST00000119999 995 ntBASIC11.84□□□□□ -0.51
Smn1P97801 Gm11543-201ENSMUST00000120758 370 ntBASIC11.84□□□□□ -0.51
Smn1P97801 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC11.84□□□□□ -0.51
Smn1P97801 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC11.84□□□□□ -0.51
Smn1P97801 Gm44492-201ENSMUST00000197012 141 ntBASIC11.84□□□□□ -0.51
Smn1P97801 Gm18041-201ENSMUST00000218210 618 ntBASIC11.84□□□□□ -0.51
Smn1P97801 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smn1P97801 AC154572.2-201ENSMUST00000225105 997 ntBASIC11.84□□□□□ -0.51
Smn1P97801 AC121598.1-201ENSMUST00000228224 1019 ntBASIC11.84□□□□□ -0.51
Smn1P97801 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smn1P97801 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smn1P97801 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smn1P97801 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Smn1P97801 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smn1P97801 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smn1P97801 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smn1P97801 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smn1P97801 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smn1P97801 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smn1P97801 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Smn1P97801 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smn1P97801 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Smn1P97801 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smn1P97801 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smn1P97801 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Smn1P97801 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.51
Smn1P97801 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smn1P97801 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smn1P97801 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Smn1P97801 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smn1P97801 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Smn1P97801 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smn1P97801 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
Smn1P97801 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smn1P97801 Gm10729-202ENSMUST00000193403 1375 ntBASIC11.83□□□□□ -0.52
Smn1P97801 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smn1P97801 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smn1P97801 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
Smn1P97801 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smn1P97801 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smn1P97801 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Smn1P97801 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC11.83□□□□□ -0.52
Smn1P97801 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smn1P97801 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Smn1P97801 Gm15957-201ENSMUST00000118893 974 ntBASIC11.83□□□□□ -0.52
Smn1P97801 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC11.83□□□□□ -0.52
Smn1P97801 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Smn1P97801 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC11.83□□□□□ -0.52
Smn1P97801 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC11.83□□□□□ -0.52
Smn1P97801 AC164629.2-201ENSMUST00000217916 270 ntBASIC11.83□□□□□ -0.52
Smn1P97801 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC11.83□□□□□ -0.52
Smn1P97801 AC159295.1-201ENSMUST00000225326 940 ntBASIC11.83□□□□□ -0.52
Smn1P97801 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smn1P97801 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smn1P97801 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smn1P97801 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smn1P97801 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Smn1P97801 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Smn1P97801 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Smn1P97801 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smn1P97801 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Smn1P97801 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Smn1P97801 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smn1P97801 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smn1P97801 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smn1P97801 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smn1P97801 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smn1P97801 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms