Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Thumpd3P97770 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Thumpd3P97770 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Thumpd3P97770 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Thumpd3P97770 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC14.11□□□□□ -0.15
Thumpd3P97770 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Thumpd3P97770 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Thumpd3P97770 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Thumpd3P97770 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Thumpd3P97770 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Thumpd3P97770 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Thumpd3P97770 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Thumpd3P97770 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Thumpd3P97770 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Thumpd3P97770 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Thumpd3P97770 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Thumpd3P97770 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Thumpd3P97770 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Thumpd3P97770 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Thumpd3P97770 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
Thumpd3P97770 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Thumpd3P97770 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Thumpd3P97770 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Thumpd3P97770 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Thumpd3P97770 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Thumpd3P97770 Gm25287-201ENSMUST00000103846 110 ntBASIC14.1□□□□□ -0.15
Thumpd3P97770 Gm22918-201ENSMUST00000103855 110 ntBASIC14.1□□□□□ -0.15
Thumpd3P97770 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Thumpd3P97770 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.1□□□□□ -0.15
Thumpd3P97770 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.1□□□□□ -0.15
Thumpd3P97770 Gm15483-201ENSMUST00000120338 456 ntBASIC14.1□□□□□ -0.15
Thumpd3P97770 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Thumpd3P97770 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Thumpd3P97770 Gm5779-201ENSMUST00000218467 910 ntBASIC14.1□□□□□ -0.15
Thumpd3P97770 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Thumpd3P97770 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Thumpd3P97770 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Thumpd3P97770 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Thumpd3P97770 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Thumpd3P97770 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Thumpd3P97770 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Thumpd3P97770 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Thumpd3P97770 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC14.1□□□□□ -0.15
Thumpd3P97770 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Thumpd3P97770 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Thumpd3P97770 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Thumpd3P97770 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Thumpd3P97770 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Thumpd3P97770 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC14.09□□□□□ -0.15
Thumpd3P97770 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Thumpd3P97770 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Thumpd3P97770 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Thumpd3P97770 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Thumpd3P97770 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Thumpd3P97770 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Thumpd3P97770 Grk6-205ENSMUST00000224653 2976 ntBASIC14.09□□□□□ -0.15
Thumpd3P97770 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Thumpd3P97770 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Thumpd3P97770 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Thumpd3P97770 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Thumpd3P97770 Gm18737-201ENSMUST00000173594 937 ntBASIC14.09□□□□□ -0.15
Thumpd3P97770 Klk2-ps-201ENSMUST00000205342 571 ntBASIC14.09□□□□□ -0.15
Thumpd3P97770 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.09□□□□□ -0.15
Thumpd3P97770 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Thumpd3P97770 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
Thumpd3P97770 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Thumpd3P97770 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.09□□□□□ -0.15
Thumpd3P97770 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Thumpd3P97770 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC14.09□□□□□ -0.15
Thumpd3P97770 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Thumpd3P97770 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Thumpd3P97770 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Thumpd3P97770 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Thumpd3P97770 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Thumpd3P97770 AC154767.3-201ENSMUST00000225150 1342 ntBASIC14.09□□□□□ -0.15
Thumpd3P97770 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Thumpd3P97770 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Thumpd3P97770 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Thumpd3P97770 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Thumpd3P97770 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.09□□□□□ -0.15
Thumpd3P97770 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Thumpd3P97770 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Thumpd3P97770 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Thumpd3P97770 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Thumpd3P97770 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Thumpd3P97770 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Thumpd3P97770 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Thumpd3P97770 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Thumpd3P97770 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Thumpd3P97770 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Thumpd3P97770 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Thumpd3P97770 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC14.08□□□□□ -0.16
Thumpd3P97770 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Thumpd3P97770 Mir7023-201ENSMUST00000185093 64 ntBASIC14.08□□□□□ -0.16
Thumpd3P97770 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC14.08□□□□□ -0.16
Thumpd3P97770 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Thumpd3P97770 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Thumpd3P97770 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Thumpd3P97770 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Thumpd3P97770 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms