Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC9.17□□□□□ -0.94
PrkdcP97313 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC9.17□□□□□ -0.94
PrkdcP97313 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
PrkdcP97313 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC9.17□□□□□ -0.94
PrkdcP97313 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
PrkdcP97313 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
PrkdcP97313 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
PrkdcP97313 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
PrkdcP97313 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC9.17□□□□□ -0.94
PrkdcP97313 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC9.17□□□□□ -0.94
PrkdcP97313 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
PrkdcP97313 Gm12899-201ENSMUST00000120565 551 ntBASIC9.17□□□□□ -0.94
PrkdcP97313 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
PrkdcP97313 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
PrkdcP97313 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
PrkdcP97313 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC9.17□□□□□ -0.94
PrkdcP97313 AC166095.1-201ENSMUST00000223731 1241 ntBASIC9.17□□□□□ -0.94
PrkdcP97313 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
PrkdcP97313 Mir219a-1-201ENSMUST00000083621 110 ntBASIC9.17□□□□□ -0.94
PrkdcP97313 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
PrkdcP97313 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
PrkdcP97313 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC9.17□□□□□ -0.94
PrkdcP97313 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
PrkdcP97313 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
PrkdcP97313 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC9.17□□□□□ -0.94
PrkdcP97313 Gm4366-201ENSMUST00000201488 1342 ntBASIC9.17□□□□□ -0.94
PrkdcP97313 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
PrkdcP97313 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
PrkdcP97313 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC9.17□□□□□ -0.94
PrkdcP97313 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
PrkdcP97313 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC9.16□□□□□ -0.94
PrkdcP97313 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
PrkdcP97313 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC9.16□□□□□ -0.94
PrkdcP97313 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
PrkdcP97313 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
PrkdcP97313 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
PrkdcP97313 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
PrkdcP97313 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC9.16□□□□□ -0.94
PrkdcP97313 Gm8228-201ENSMUST00000189949 2192 ntBASIC9.16□□□□□ -0.94
PrkdcP97313 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
PrkdcP97313 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
PrkdcP97313 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
PrkdcP97313 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
PrkdcP97313 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC9.16□□□□□ -0.94
PrkdcP97313 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
PrkdcP97313 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
PrkdcP97313 Gm17889-201ENSMUST00000198410 598 ntBASIC9.16□□□□□ -0.94
PrkdcP97313 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
PrkdcP97313 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
PrkdcP97313 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
PrkdcP97313 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
PrkdcP97313 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
PrkdcP97313 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
PrkdcP97313 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
PrkdcP97313 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
PrkdcP97313 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
PrkdcP97313 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC9.16□□□□□ -0.94
PrkdcP97313 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
PrkdcP97313 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
PrkdcP97313 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
PrkdcP97313 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
PrkdcP97313 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
PrkdcP97313 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
PrkdcP97313 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
PrkdcP97313 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
PrkdcP97313 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
PrkdcP97313 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC9.16□□□□□ -0.94
PrkdcP97313 Gm12058-201ENSMUST00000118614 437 ntBASIC9.16□□□□□ -0.94
PrkdcP97313 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC9.16□□□□□ -0.94
PrkdcP97313 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC9.16□□□□□ -0.94
PrkdcP97313 Gm3318-201ENSMUST00000217604 1183 ntBASIC9.16□□□□□ -0.94
PrkdcP97313 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
PrkdcP97313 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
PrkdcP97313 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
PrkdcP97313 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC9.16□□□□□ -0.94
PrkdcP97313 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC9.16□□□□□ -0.94
PrkdcP97313 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
PrkdcP97313 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
PrkdcP97313 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
PrkdcP97313 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC9.16□□□□□ -0.94
PrkdcP97313 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC9.16□□□□□ -0.94
PrkdcP97313 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
PrkdcP97313 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC9.15□□□□□ -0.94
PrkdcP97313 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
PrkdcP97313 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
PrkdcP97313 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
PrkdcP97313 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
PrkdcP97313 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
PrkdcP97313 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC9.15□□□□□ -0.94
PrkdcP97313 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
PrkdcP97313 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
PrkdcP97313 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
PrkdcP97313 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC9.15□□□□□ -0.94
PrkdcP97313 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC9.15□□□□□ -0.94
PrkdcP97313 Gm13539-202ENSMUST00000211245 552 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
PrkdcP97313 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC9.15□□□□□ -0.94
PrkdcP97313 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
PrkdcP97313 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
PrkdcP97313 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
PrkdcP97313 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms