Protein–RNA interactions for Protein: P70354

Msx3, Homeobox protein MSX-3, mousemouse

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3P70354 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Msx3P70354 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Msx3P70354 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Msx3P70354 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Msx3P70354 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Msx3P70354 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Msx3P70354 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Msx3P70354 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Msx3P70354 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Msx3P70354 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC14.23□□□□□ -0.13
Msx3P70354 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC14.23□□□□□ -0.13
Msx3P70354 AC124732.2-201ENSMUST00000221977 316 ntBASIC14.23□□□□□ -0.13
Msx3P70354 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Msx3P70354 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Msx3P70354 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Msx3P70354 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Msx3P70354 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Msx3P70354 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Msx3P70354 Gm8337-201ENSMUST00000187358 1938 ntBASIC14.23□□□□□ -0.13
Msx3P70354 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Msx3P70354 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Msx3P70354 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Msx3P70354 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Msx3P70354 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.23□□□□□ -0.13
Msx3P70354 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Msx3P70354 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Msx3P70354 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Msx3P70354 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Msx3P70354 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Msx3P70354 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Msx3P70354 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Msx3P70354 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Msx3P70354 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Msx3P70354 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Msx3P70354 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Msx3P70354 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Msx3P70354 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Msx3P70354 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC14.22□□□□□ -0.13
Msx3P70354 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.22□□□□□ -0.13
Msx3P70354 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Msx3P70354 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Msx3P70354 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC14.22□□□□□ -0.13
Msx3P70354 Gm14767-201ENSMUST00000121559 586 ntBASIC14.22□□□□□ -0.13
Msx3P70354 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Msx3P70354 Gm3436-201ENSMUST00000179930 840 ntBASIC14.22□□□□□ -0.13
Msx3P70354 Gm27680-201ENSMUST00000184192 160 ntBASIC14.22□□□□□ -0.13
Msx3P70354 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC14.22□□□□□ -0.13
Msx3P70354 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC14.22□□□□□ -0.13
Msx3P70354 AC154595.3-201ENSMUST00000224579 384 ntBASIC14.22□□□□□ -0.13
Msx3P70354 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Msx3P70354 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Msx3P70354 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Msx3P70354 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Msx3P70354 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Msx3P70354 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Msx3P70354 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Msx3P70354 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Msx3P70354 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Msx3P70354 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Msx3P70354 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Msx3P70354 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Msx3P70354 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Msx3P70354 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Msx3P70354 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Msx3P70354 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Msx3P70354 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Msx3P70354 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Msx3P70354 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Msx3P70354 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Msx3P70354 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Msx3P70354 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Msx3P70354 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Msx3P70354 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC14.21□□□□□ -0.13
Msx3P70354 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Msx3P70354 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Msx3P70354 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
Msx3P70354 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Msx3P70354 Gm22175-201ENSMUST00000175007 78 ntBASIC14.21□□□□□ -0.13
Msx3P70354 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Msx3P70354 Gm44344-201ENSMUST00000200287 129 ntBASIC14.21□□□□□ -0.13
Msx3P70354 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Msx3P70354 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Msx3P70354 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Msx3P70354 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Msx3P70354 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC14.21□□□□□ -0.13
Msx3P70354 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Msx3P70354 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Msx3P70354 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.21□□□□□ -0.14
Msx3P70354 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Msx3P70354 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Msx3P70354 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Msx3P70354 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Msx3P70354 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Msx3P70354 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Msx3P70354 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Msx3P70354 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Msx3P70354 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Msx3P70354 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Msx3P70354 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.2□□□□□ -0.14
Msx3P70354 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms