Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ThraP63058 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ThraP63058 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ThraP63058 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
ThraP63058 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
ThraP63058 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ThraP63058 Acot6-202ENSMUST00000222921 3622 ntBASIC14.02□□□□□ -0.16
ThraP63058 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
ThraP63058 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
ThraP63058 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ThraP63058 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ThraP63058 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ThraP63058 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
ThraP63058 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ThraP63058 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC14.02□□□□□ -0.16
ThraP63058 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
ThraP63058 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
ThraP63058 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
ThraP63058 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC14.02□□□□□ -0.16
ThraP63058 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ThraP63058 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC14.02□□□□□ -0.17
ThraP63058 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
ThraP63058 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC14.02□□□□□ -0.17
ThraP63058 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ThraP63058 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC14.02□□□□□ -0.17
ThraP63058 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ThraP63058 Dupd1-202ENSMUST00000224735 548 ntBASIC14.02□□□□□ -0.17
ThraP63058 AC238811.1-201ENSMUST00000225302 441 ntBASIC14.02□□□□□ -0.17
ThraP63058 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ThraP63058 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ThraP63058 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ThraP63058 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ThraP63058 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
ThraP63058 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
ThraP63058 Gm6198-201ENSMUST00000191337 2929 ntBASIC14.02□□□□□ -0.17
ThraP63058 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
ThraP63058 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
ThraP63058 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
ThraP63058 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.02□□□□□ -0.17
ThraP63058 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
ThraP63058 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
ThraP63058 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ThraP63058 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ThraP63058 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ThraP63058 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
ThraP63058 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
ThraP63058 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.01□□□□□ -0.17
ThraP63058 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC14.01□□□□□ -0.17
ThraP63058 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
ThraP63058 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ThraP63058 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ThraP63058 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.01□□□□□ -0.17
ThraP63058 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
ThraP63058 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
ThraP63058 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
ThraP63058 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC14.01□□□□□ -0.17
ThraP63058 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.01□□□□□ -0.17
ThraP63058 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.01□□□□□ -0.17
ThraP63058 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.01□□□□□ -0.17
ThraP63058 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ThraP63058 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
ThraP63058 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC14.01□□□□□ -0.17
ThraP63058 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ThraP63058 Gm46209-201ENSMUST00000217912 553 ntBASIC14.01□□□□□ -0.17
ThraP63058 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ThraP63058 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ThraP63058 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ThraP63058 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ThraP63058 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ThraP63058 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ThraP63058 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
ThraP63058 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
ThraP63058 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
ThraP63058 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14□□□□□ -0.17
ThraP63058 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC14□□□□□ -0.17
ThraP63058 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
ThraP63058 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ThraP63058 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ThraP63058 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ThraP63058 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ThraP63058 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
ThraP63058 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14□□□□□ -0.17
ThraP63058 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ThraP63058 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
ThraP63058 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC14□□□□□ -0.17
ThraP63058 Gm43703-201ENSMUST00000200523 763 ntBASIC14□□□□□ -0.17
ThraP63058 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC14□□□□□ -0.17
ThraP63058 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
ThraP63058 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ThraP63058 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC14□□□□□ -0.17
ThraP63058 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
ThraP63058 Gm43364-201ENSMUST00000196046 3274 ntBASIC14□□□□□ -0.17
ThraP63058 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ThraP63058 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ThraP63058 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ThraP63058 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14□□□□□ -0.17
ThraP63058 Pcgf5-211ENSMUST00000225920 6443 ntBASIC14□□□□□ -0.17
ThraP63058 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
ThraP63058 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
ThraP63058 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms