Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lsm5P62322 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Lsm5P62322 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC11.51□□□□□ -0.57
Lsm5P62322 Gm7284-201ENSMUST00000131667 944 ntBASIC11.51□□□□□ -0.57
Lsm5P62322 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lsm5P62322 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Lsm5P62322 Gm27357-201ENSMUST00000183754 135 ntBASIC11.51□□□□□ -0.57
Lsm5P62322 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lsm5P62322 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Lsm5P62322 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lsm5P62322 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Lsm5P62322 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lsm5P62322 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC11.51□□□□□ -0.57
Lsm5P62322 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lsm5P62322 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lsm5P62322 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lsm5P62322 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lsm5P62322 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Lsm5P62322 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lsm5P62322 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lsm5P62322 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Lsm5P62322 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lsm5P62322 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lsm5P62322 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Lsm5P62322 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Lsm5P62322 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Lsm5P62322 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Lsm5P62322 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC11.51□□□□□ -0.57
Lsm5P62322 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lsm5P62322 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lsm5P62322 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Lsm5P62322 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lsm5P62322 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lsm5P62322 Gm38355-201ENSMUST00000192514 1570 ntBASIC11.5□□□□□ -0.57
Lsm5P62322 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lsm5P62322 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Lsm5P62322 Gm9347-201ENSMUST00000211473 1607 ntBASIC11.5□□□□□ -0.57
Lsm5P62322 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lsm5P62322 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lsm5P62322 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC11.5□□□□□ -0.57
Lsm5P62322 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Lsm5P62322 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lsm5P62322 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lsm5P62322 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lsm5P62322 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Lsm5P62322 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC11.5□□□□□ -0.57
Lsm5P62322 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Lsm5P62322 AC121577.1-201ENSMUST00000227302 707 ntBASIC11.5□□□□□ -0.57
Lsm5P62322 Spcs1-207ENSMUST00000228767 1008 ntBASIC11.5□□□□□ -0.57
Lsm5P62322 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lsm5P62322 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lsm5P62322 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lsm5P62322 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Lsm5P62322 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Lsm5P62322 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lsm5P62322 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lsm5P62322 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Lsm5P62322 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lsm5P62322 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lsm5P62322 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC11.5□□□□□ -0.57
Lsm5P62322 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.5□□□□□ -0.57
Lsm5P62322 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Lsm5P62322 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC11.5□□□□□ -0.57
Lsm5P62322 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lsm5P62322 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm5P62322 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm5P62322 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm5P62322 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm5P62322 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC11.49□□□□□ -0.57
Lsm5P62322 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm5P62322 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm5P62322 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC11.49□□□□□ -0.57
Lsm5P62322 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC11.49□□□□□ -0.57
Lsm5P62322 Gm10252-201ENSMUST00000209541 832 ntBASIC11.49□□□□□ -0.57
Lsm5P62322 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm5P62322 Gm45747-201ENSMUST00000212203 999 ntBASIC11.49□□□□□ -0.57
Lsm5P62322 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC11.49□□□□□ -0.57
Lsm5P62322 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm5P62322 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm5P62322 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm5P62322 Gm5366-201ENSMUST00000215494 1338 ntBASIC11.49□□□□□ -0.57
Lsm5P62322 Gm9109-201ENSMUST00000120254 1405 ntBASIC11.49□□□□□ -0.57
Lsm5P62322 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm5P62322 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm5P62322 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm5P62322 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC11.49□□□□□ -0.57
Lsm5P62322 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm5P62322 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm5P62322 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm5P62322 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm5P62322 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Lsm5P62322 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm5P62322 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm5P62322 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC11.49□□□□□ -0.57
Lsm5P62322 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm5P62322 Gm28386-201ENSMUST00000189147 1849 ntBASIC11.49□□□□□ -0.57
Lsm5P62322 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm5P62322 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lsm5P62322 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC11.48□□□□□ -0.57
Lsm5P62322 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms