Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Sec61a1P61620 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.46
Sec61a1P61620 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sec61a1P61620 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sec61a1P61620 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.21□□□□□ -0.46
Sec61a1P61620 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.46
Sec61a1P61620 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Sec61a1P61620 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sec61a1P61620 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.21□□□□□ -0.46
Sec61a1P61620 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sec61a1P61620 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sec61a1P61620 Mmp14-206ENSMUST00000225641 3238 ntBASIC12.2□□□□□ -0.46
Sec61a1P61620 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sec61a1P61620 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sec61a1P61620 Gm13233-201ENSMUST00000118760 1443 ntBASIC12.2□□□□□ -0.46
Sec61a1P61620 Gm13244-201ENSMUST00000118855 1446 ntBASIC12.2□□□□□ -0.46
Sec61a1P61620 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Sec61a1P61620 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sec61a1P61620 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sec61a1P61620 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Sec61a1P61620 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sec61a1P61620 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Sec61a1P61620 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Sec61a1P61620 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Sec61a1P61620 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.2□□□□□ -0.46
Sec61a1P61620 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sec61a1P61620 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sec61a1P61620 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Sec61a1P61620 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sec61a1P61620 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sec61a1P61620 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sec61a1P61620 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sec61a1P61620 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sec61a1P61620 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC12.2□□□□□ -0.46
Sec61a1P61620 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sec61a1P61620 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC12.2□□□□□ -0.46
Sec61a1P61620 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC12.2□□□□□ -0.46
Sec61a1P61620 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sec61a1P61620 Mir6956-201ENSMUST00000183598 62 ntBASIC12.2□□□□□ -0.46
Sec61a1P61620 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sec61a1P61620 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC12.2□□□□□ -0.46
Sec61a1P61620 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC12.2□□□□□ -0.46
Sec61a1P61620 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sec61a1P61620 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sec61a1P61620 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sec61a1P61620 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sec61a1P61620 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sec61a1P61620 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sec61a1P61620 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sec61a1P61620 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sec61a1P61620 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sec61a1P61620 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sec61a1P61620 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sec61a1P61620 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sec61a1P61620 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sec61a1P61620 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sec61a1P61620 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sec61a1P61620 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sec61a1P61620 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sec61a1P61620 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sec61a1P61620 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sec61a1P61620 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sec61a1P61620 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sec61a1P61620 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sec61a1P61620 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sec61a1P61620 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sec61a1P61620 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sec61a1P61620 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sec61a1P61620 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
Sec61a1P61620 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
Sec61a1P61620 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sec61a1P61620 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
Sec61a1P61620 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sec61a1P61620 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Sec61a1P61620 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sec61a1P61620 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sec61a1P61620 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Sec61a1P61620 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Sec61a1P61620 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Sec61a1P61620 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sec61a1P61620 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sec61a1P61620 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC12.19□□□□□ -0.46
Sec61a1P61620 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Sec61a1P61620 Gm10576-201ENSMUST00000191927 825 ntBASIC12.19□□□□□ -0.46
Sec61a1P61620 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sec61a1P61620 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC12.19□□□□□ -0.46
Sec61a1P61620 Gm7774-201ENSMUST00000200064 533 ntBASIC12.19□□□□□ -0.46
Sec61a1P61620 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC12.19□□□□□ -0.46
Sec61a1P61620 AC140397.2-201ENSMUST00000224213 834 ntBASIC12.19□□□□□ -0.46
Sec61a1P61620 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sec61a1P61620 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sec61a1P61620 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sec61a1P61620 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.19□□□□□ -0.46
Sec61a1P61620 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sec61a1P61620 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sec61a1P61620 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sec61a1P61620 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sec61a1P61620 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Sec61a1P61620 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sec61a1P61620 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms