Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sf3b6P59708 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sf3b6P59708 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sf3b6P59708 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Sf3b6P59708 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sf3b6P59708 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sf3b6P59708 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sf3b6P59708 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sf3b6P59708 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
Sf3b6P59708 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sf3b6P59708 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sf3b6P59708 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sf3b6P59708 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sf3b6P59708 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sf3b6P59708 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sf3b6P59708 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sf3b6P59708 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sf3b6P59708 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.27□□□□□ -0.44
Sf3b6P59708 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Sf3b6P59708 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sf3b6P59708 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Sf3b6P59708 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sf3b6P59708 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Sf3b6P59708 Syt7-205ENSMUST00000224135 1557 ntBASIC12.27□□□□□ -0.44
Sf3b6P59708 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sf3b6P59708 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Sf3b6P59708 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Sf3b6P59708 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.27□□□□□ -0.44
Sf3b6P59708 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Sf3b6P59708 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Sf3b6P59708 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sf3b6P59708 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.27□□□□□ -0.45
Sf3b6P59708 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Sf3b6P59708 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.27□□□□□ -0.45
Sf3b6P59708 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sf3b6P59708 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC12.27□□□□□ -0.45
Sf3b6P59708 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Sf3b6P59708 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Sf3b6P59708 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC12.27□□□□□ -0.45
Sf3b6P59708 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Sf3b6P59708 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC12.27□□□□□ -0.45
Sf3b6P59708 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC12.27□□□□□ -0.45
Sf3b6P59708 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Sf3b6P59708 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Sf3b6P59708 Bloc1s5-203ENSMUST00000224902 612 ntBASIC12.27□□□□□ -0.45
Sf3b6P59708 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Sf3b6P59708 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sf3b6P59708 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sf3b6P59708 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Sf3b6P59708 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Sf3b6P59708 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sf3b6P59708 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sf3b6P59708 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Sf3b6P59708 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sf3b6P59708 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Sf3b6P59708 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Sf3b6P59708 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.27□□□□□ -0.45
Sf3b6P59708 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sf3b6P59708 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC12.26□□□□□ -0.45
Sf3b6P59708 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sf3b6P59708 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.26□□□□□ -0.45
Sf3b6P59708 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sf3b6P59708 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sf3b6P59708 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sf3b6P59708 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sf3b6P59708 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sf3b6P59708 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sf3b6P59708 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sf3b6P59708 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sf3b6P59708 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sf3b6P59708 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sf3b6P59708 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sf3b6P59708 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Sf3b6P59708 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.26□□□□□ -0.45
Sf3b6P59708 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC12.26□□□□□ -0.45
Sf3b6P59708 Gm2756-201ENSMUST00000195851 400 ntBASIC12.26□□□□□ -0.45
Sf3b6P59708 CT943659.1-201ENSMUST00000215459 326 ntBASIC12.26□□□□□ -0.45
Sf3b6P59708 AC139350.3-201ENSMUST00000226151 420 ntBASIC12.26□□□□□ -0.45
Sf3b6P59708 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sf3b6P59708 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sf3b6P59708 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sf3b6P59708 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Sf3b6P59708 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Sf3b6P59708 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC12.26□□□□□ -0.45
Sf3b6P59708 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.26□□□□□ -0.45
Sf3b6P59708 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sf3b6P59708 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sf3b6P59708 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.26□□□□□ -0.45
Sf3b6P59708 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sf3b6P59708 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Sf3b6P59708 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sf3b6P59708 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sf3b6P59708 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sf3b6P59708 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sf3b6P59708 CT025626.1-201ENSMUST00000223735 1455 ntBASIC12.26□□□□□ -0.45
Sf3b6P59708 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sf3b6P59708 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sf3b6P59708 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sf3b6P59708 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sf3b6P59708 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms