Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Msh6P54276 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Msh6P54276 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Msh6P54276 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Msh6P54276 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Msh6P54276 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Msh6P54276 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Msh6P54276 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC17.4■□□□□ 0.38
Msh6P54276 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Msh6P54276 Zkscan3-208ENSMUST00000224820 5398 ntBASIC17.4■□□□□ 0.38
Msh6P54276 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC17.4■□□□□ 0.38
Msh6P54276 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Msh6P54276 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
Msh6P54276 Gm10339-203ENSMUST00000225409 1671 ntBASIC17.4■□□□□ 0.38
Msh6P54276 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Msh6P54276 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Msh6P54276 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Msh6P54276 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Msh6P54276 Gm12537-201ENSMUST00000119266 1002 ntBASIC17.4■□□□□ 0.38
Msh6P54276 Gm12070-201ENSMUST00000119551 1002 ntBASIC17.4■□□□□ 0.38
Msh6P54276 Gm12671-201ENSMUST00000119978 1002 ntBASIC17.4■□□□□ 0.38
Msh6P54276 Gm13292-201ENSMUST00000120014 1000 ntBASIC17.4■□□□□ 0.38
Msh6P54276 Gm12403-201ENSMUST00000121384 959 ntBASIC17.4■□□□□ 0.38
Msh6P54276 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC17.4■□□□□ 0.38
Msh6P54276 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Msh6P54276 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Msh6P54276 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC17.4■□□□□ 0.38
Msh6P54276 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Msh6P54276 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Msh6P54276 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Msh6P54276 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Msh6P54276 Gm4271-201ENSMUST00000174444 973 ntBASIC17.4■□□□□ 0.38
Msh6P54276 Gm10359-201ENSMUST00000180167 1002 ntBASIC17.4■□□□□ 0.38
Msh6P54276 Gm12033-201ENSMUST00000180654 1002 ntBASIC17.4■□□□□ 0.38
Msh6P54276 Gm5559-201ENSMUST00000180755 1002 ntBASIC17.4■□□□□ 0.38
Msh6P54276 Gm4335-201ENSMUST00000182581 1004 ntBASIC17.4■□□□□ 0.38
Msh6P54276 Gm17823-201ENSMUST00000217830 1006 ntBASIC17.4■□□□□ 0.38
Msh6P54276 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Msh6P54276 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.38
Msh6P54276 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Msh6P54276 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Msh6P54276 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Msh6P54276 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Msh6P54276 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Msh6P54276 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Msh6P54276 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Msh6P54276 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Msh6P54276 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Msh6P54276 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Msh6P54276 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Msh6P54276 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Msh6P54276 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Msh6P54276 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Msh6P54276 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Msh6P54276 Gm10327-201ENSMUST00000105222 1002 ntBASIC17.39■□□□□ 0.37
Msh6P54276 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Msh6P54276 Gm3961-201ENSMUST00000204425 994 ntBASIC17.39■□□□□ 0.37
Msh6P54276 AC133598.1-201ENSMUST00000224327 660 ntBASIC17.39■□□□□ 0.37
Msh6P54276 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Msh6P54276 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Msh6P54276 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Msh6P54276 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Msh6P54276 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Msh6P54276 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
Msh6P54276 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Msh6P54276 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC17.39■□□□□ 0.37
Msh6P54276 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Msh6P54276 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Msh6P54276 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Msh6P54276 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Msh6P54276 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Msh6P54276 Gm42872-201ENSMUST00000200026 1967 ntBASIC17.38■□□□□ 0.37
Msh6P54276 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Msh6P54276 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Msh6P54276 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC17.38■□□□□ 0.37
Msh6P54276 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Msh6P54276 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Msh6P54276 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Msh6P54276 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Msh6P54276 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Msh6P54276 Gm12846-201ENSMUST00000120431 1373 ntBASIC17.38■□□□□ 0.37
Msh6P54276 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Msh6P54276 Gm12203-201ENSMUST00000118235 598 ntBASIC17.38■□□□□ 0.37
Msh6P54276 Gm12209-201ENSMUST00000120089 596 ntBASIC17.38■□□□□ 0.37
Msh6P54276 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Msh6P54276 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Msh6P54276 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Msh6P54276 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC17.38■□□□□ 0.37
Msh6P54276 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Msh6P54276 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.38■□□□□ 0.37
Msh6P54276 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Msh6P54276 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Msh6P54276 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
Msh6P54276 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Msh6P54276 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Msh6P54276 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Msh6P54276 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Msh6P54276 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Msh6P54276 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Msh6P54276 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms