Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx2-1P50220 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx2-1P50220 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC11.47□□□□□ -0.57
Nkx2-1P50220 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
Nkx2-1P50220 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx2-1P50220 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC11.47□□□□□ -0.57
Nkx2-1P50220 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx2-1P50220 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx2-1P50220 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx2-1P50220 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx2-1P50220 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx2-1P50220 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx2-1P50220 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Nkx2-1P50220 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx2-1P50220 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx2-1P50220 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nkx2-1P50220 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nkx2-1P50220 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nkx2-1P50220 Gm37861-201ENSMUST00000193534 2869 ntBASIC11.46□□□□□ -0.57
Nkx2-1P50220 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nkx2-1P50220 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC11.46□□□□□ -0.57
Nkx2-1P50220 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nkx2-1P50220 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Nkx2-1P50220 Gm9347-201ENSMUST00000211473 1607 ntBASIC11.46□□□□□ -0.57
Nkx2-1P50220 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nkx2-1P50220 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nkx2-1P50220 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nkx2-1P50220 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nkx2-1P50220 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nkx2-1P50220 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nkx2-1P50220 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nkx2-1P50220 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nkx2-1P50220 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC11.46□□□□□ -0.57
Nkx2-1P50220 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nkx2-1P50220 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC11.46□□□□□ -0.57
Nkx2-1P50220 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Nkx2-1P50220 Gm43332-201ENSMUST00000202511 1044 ntBASIC11.46□□□□□ -0.57
Nkx2-1P50220 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC11.46□□□□□ -0.57
Nkx2-1P50220 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC11.46□□□□□ -0.57
Nkx2-1P50220 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nkx2-1P50220 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Nkx2-1P50220 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Nkx2-1P50220 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.58
Nkx2-1P50220 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Nkx2-1P50220 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Nkx2-1P50220 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Nkx2-1P50220 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Nkx2-1P50220 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Nkx2-1P50220 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Nkx2-1P50220 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Nkx2-1P50220 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx2-1P50220 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx2-1P50220 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx2-1P50220 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx2-1P50220 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx2-1P50220 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx2-1P50220 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx2-1P50220 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx2-1P50220 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx2-1P50220 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx2-1P50220 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Nkx2-1P50220 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx2-1P50220 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx2-1P50220 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx2-1P50220 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx2-1P50220 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
Nkx2-1P50220 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx2-1P50220 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC11.45□□□□□ -0.58
Nkx2-1P50220 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Nkx2-1P50220 Gm27300-201ENSMUST00000184085 97 ntBASIC11.45□□□□□ -0.58
Nkx2-1P50220 Gm27335-201ENSMUST00000184758 97 ntBASIC11.45□□□□□ -0.58
Nkx2-1P50220 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx2-1P50220 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC11.45□□□□□ -0.58
Nkx2-1P50220 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Nkx2-1P50220 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC11.45□□□□□ -0.58
Nkx2-1P50220 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC11.45□□□□□ -0.58
Nkx2-1P50220 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx2-1P50220 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx2-1P50220 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC11.45□□□□□ -0.58
Nkx2-1P50220 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx2-1P50220 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx2-1P50220 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Nkx2-1P50220 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx2-1P50220 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx2-1P50220 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx2-1P50220 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC11.45□□□□□ -0.58
Nkx2-1P50220 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx2-1P50220 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx2-1P50220 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx2-1P50220 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Nkx2-1P50220 AC238940.1-201ENSMUST00000225106 1858 ntBASIC11.44□□□□□ -0.58
Nkx2-1P50220 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx2-1P50220 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx2-1P50220 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx2-1P50220 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx2-1P50220 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC11.44□□□□□ -0.58
Nkx2-1P50220 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx2-1P50220 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx2-1P50220 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx2-1P50220 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms