Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC8.94□□□□□ -0.98
Xcl1P47993 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Xcl1P47993 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC8.94□□□□□ -0.98
Xcl1P47993 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Xcl1P47993 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Xcl1P47993 Gm42642-201ENSMUST00000200683 355 ntBASIC8.94□□□□□ -0.98
Xcl1P47993 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC8.94□□□□□ -0.98
Xcl1P47993 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Xcl1P47993 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Xcl1P47993 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Xcl1P47993 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Xcl1P47993 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC8.94□□□□□ -0.98
Xcl1P47993 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Xcl1P47993 Gm13730-201ENSMUST00000121036 1462 ntBASIC8.94□□□□□ -0.98
Xcl1P47993 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC8.94□□□□□ -0.98
Xcl1P47993 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Xcl1P47993 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Xcl1P47993 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Xcl1P47993 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Xcl1P47993 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Xcl1P47993 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Xcl1P47993 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Xcl1P47993 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Xcl1P47993 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Xcl1P47993 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Xcl1P47993 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Xcl1P47993 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
Xcl1P47993 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Xcl1P47993 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Xcl1P47993 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Xcl1P47993 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Xcl1P47993 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Xcl1P47993 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Xcl1P47993 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
Xcl1P47993 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Xcl1P47993 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
Xcl1P47993 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Xcl1P47993 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Xcl1P47993 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Xcl1P47993 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Xcl1P47993 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Xcl1P47993 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Xcl1P47993 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Xcl1P47993 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Xcl1P47993 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Xcl1P47993 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Xcl1P47993 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Xcl1P47993 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Xcl1P47993 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Xcl1P47993 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Xcl1P47993 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Xcl1P47993 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Xcl1P47993 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
Xcl1P47993 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Xcl1P47993 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC8.93□□□□□ -0.98
Xcl1P47993 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Xcl1P47993 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Xcl1P47993 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC8.93□□□□□ -0.98
Xcl1P47993 Timm23-208ENSMUST00000226683 750 ntBASIC8.93□□□□□ -0.98
Xcl1P47993 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Xcl1P47993 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
Xcl1P47993 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Xcl1P47993 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
Xcl1P47993 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Xcl1P47993 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Xcl1P47993 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Xcl1P47993 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
Xcl1P47993 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Xcl1P47993 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
Xcl1P47993 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Xcl1P47993 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Xcl1P47993 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC8.93□□□□□ -0.98
Xcl1P47993 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Xcl1P47993 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Xcl1P47993 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC8.93□□□□□ -0.98
Xcl1P47993 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC8.93□□□□□ -0.98
Xcl1P47993 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Xcl1P47993 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Xcl1P47993 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Xcl1P47993 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Xcl1P47993 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Xcl1P47993 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC8.93□□□□□ -0.98
Xcl1P47993 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Xcl1P47993 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Xcl1P47993 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Xcl1P47993 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Xcl1P47993 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC8.93□□□□□ -0.98
Xcl1P47993 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Xcl1P47993 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC8.92□□□□□ -0.98
Xcl1P47993 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
Xcl1P47993 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC8.92□□□□□ -0.98
Xcl1P47993 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Xcl1P47993 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Xcl1P47993 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC8.92□□□□□ -0.98
Xcl1P47993 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Xcl1P47993 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Xcl1P47993 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Xcl1P47993 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Xcl1P47993 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Xcl1P47993 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms