Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC13.01□□□□□ -0.33
Sox6P40645 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.01□□□□□ -0.33
Sox6P40645 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sox6P40645 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sox6P40645 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC13.01□□□□□ -0.33
Sox6P40645 Gm5867-201ENSMUST00000063197 592 ntBASIC13.01□□□□□ -0.33
Sox6P40645 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox6P40645 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC13.01□□□□□ -0.33
Sox6P40645 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Sox6P40645 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox6P40645 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Sox6P40645 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox6P40645 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox6P40645 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox6P40645 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.01□□□□□ -0.33
Sox6P40645 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox6P40645 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox6P40645 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sox6P40645 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox6P40645 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sox6P40645 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sox6P40645 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox6P40645 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox6P40645 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox6P40645 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sox6P40645 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox6P40645 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox6P40645 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox6P40645 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Sox6P40645 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox6P40645 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox6P40645 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox6P40645 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox6P40645 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Sox6P40645 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sox6P40645 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox6P40645 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox6P40645 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13□□□□□ -0.33
Sox6P40645 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Sox6P40645 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox6P40645 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox6P40645 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox6P40645 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox6P40645 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Sox6P40645 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Sox6P40645 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sox6P40645 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox6P40645 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC13□□□□□ -0.33
Sox6P40645 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sox6P40645 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC13□□□□□ -0.33
Sox6P40645 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sox6P40645 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sox6P40645 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox6P40645 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox6P40645 Mmp14-206ENSMUST00000225641 3238 ntBASIC13□□□□□ -0.33
Sox6P40645 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sox6P40645 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox6P40645 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sox6P40645 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Sox6P40645 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox6P40645 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox6P40645 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox6P40645 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sox6P40645 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Sox6P40645 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Sox6P40645 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox6P40645 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sox6P40645 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sox6P40645 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox6P40645 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox6P40645 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sox6P40645 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox6P40645 Gm6756-201ENSMUST00000180647 1620 ntBASIC12.99□□□□□ -0.33
Sox6P40645 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox6P40645 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Sox6P40645 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox6P40645 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox6P40645 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sox6P40645 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox6P40645 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox6P40645 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox6P40645 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox6P40645 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox6P40645 Gm25287-201ENSMUST00000103846 110 ntBASIC12.99□□□□□ -0.33
Sox6P40645 Gm22918-201ENSMUST00000103855 110 ntBASIC12.99□□□□□ -0.33
Sox6P40645 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC12.99□□□□□ -0.33
Sox6P40645 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC12.99□□□□□ -0.33
Sox6P40645 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC12.99□□□□□ -0.33
Sox6P40645 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC12.99□□□□□ -0.33
Sox6P40645 Ighv8-7-201ENSMUST00000194349 297 ntBASIC12.99□□□□□ -0.33
Sox6P40645 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sox6P40645 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC12.99□□□□□ -0.33
Sox6P40645 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC12.99□□□□□ -0.33
Sox6P40645 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC12.99□□□□□ -0.33
Sox6P40645 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.99□□□□□ -0.33
Sox6P40645 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox6P40645 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox6P40645 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox6P40645 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox6P40645 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms