Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cd40P27512 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Cd40P27512 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.51□□□□□ -0.41
Cd40P27512 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cd40P27512 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Cd40P27512 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cd40P27512 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cd40P27512 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cd40P27512 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cd40P27512 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cd40P27512 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cd40P27512 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cd40P27512 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cd40P27512 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cd40P27512 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cd40P27512 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cd40P27512 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cd40P27512 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cd40P27512 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cd40P27512 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Cd40P27512 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Cd40P27512 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cd40P27512 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cd40P27512 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cd40P27512 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.5□□□□□ -0.41
Cd40P27512 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC12.5□□□□□ -0.41
Cd40P27512 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cd40P27512 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC12.5□□□□□ -0.41
Cd40P27512 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.5□□□□□ -0.41
Cd40P27512 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.5□□□□□ -0.41
Cd40P27512 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.5□□□□□ -0.41
Cd40P27512 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cd40P27512 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cd40P27512 Gm9797-201ENSMUST00000052902 613 ntBASIC12.5□□□□□ -0.41
Cd40P27512 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cd40P27512 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Cd40P27512 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cd40P27512 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cd40P27512 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cd40P27512 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cd40P27512 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cd40P27512 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cd40P27512 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cd40P27512 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cd40P27512 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cd40P27512 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cd40P27512 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cd40P27512 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cd40P27512 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cd40P27512 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cd40P27512 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cd40P27512 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC12.49□□□□□ -0.41
Cd40P27512 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.49□□□□□ -0.41
Cd40P27512 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.49□□□□□ -0.41
Cd40P27512 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cd40P27512 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Cd40P27512 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cd40P27512 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cd40P27512 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Cd40P27512 Gm3365-201ENSMUST00000216296 1480 ntBASIC12.49□□□□□ -0.41
Cd40P27512 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cd40P27512 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC12.49□□□□□ -0.41
Cd40P27512 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.49□□□□□ -0.41
Cd40P27512 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cd40P27512 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.49□□□□□ -0.41
Cd40P27512 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC12.49□□□□□ -0.41
Cd40P27512 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC12.49□□□□□ -0.41
Cd40P27512 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cd40P27512 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cd40P27512 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cd40P27512 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Cd40P27512 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC12.49□□□□□ -0.41
Cd40P27512 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC12.49□□□□□ -0.41
Cd40P27512 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.49□□□□□ -0.41
Cd40P27512 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cd40P27512 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Cd40P27512 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cd40P27512 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cd40P27512 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cd40P27512 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cd40P27512 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cd40P27512 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Cd40P27512 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.49□□□□□ -0.41
Cd40P27512 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cd40P27512 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cd40P27512 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Cd40P27512 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Cd40P27512 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cd40P27512 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cd40P27512 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cd40P27512 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cd40P27512 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Cd40P27512 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
Cd40P27512 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.48□□□□□ -0.41
Cd40P27512 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cd40P27512 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Cd40P27512 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Cd40P27512 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cd40P27512 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cd40P27512 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms