Protein–RNA interactions for Protein: P20615

Hoxb9, Homeobox protein Hox-B9, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb9P20615 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.24□□□□□ -0.29
Hoxb9P20615 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hoxb9P20615 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hoxb9P20615 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hoxb9P20615 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hoxb9P20615 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Hoxb9P20615 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.23□□□□□ -0.29
Hoxb9P20615 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hoxb9P20615 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hoxb9P20615 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hoxb9P20615 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Hoxb9P20615 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hoxb9P20615 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hoxb9P20615 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hoxb9P20615 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Hoxb9P20615 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hoxb9P20615 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Hoxb9P20615 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Hoxb9P20615 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hoxb9P20615 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC13.23□□□□□ -0.29
Hoxb9P20615 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hoxb9P20615 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Hoxb9P20615 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC13.23□□□□□ -0.29
Hoxb9P20615 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC13.23□□□□□ -0.29
Hoxb9P20615 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Hoxb9P20615 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hoxb9P20615 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Hoxb9P20615 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hoxb9P20615 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hoxb9P20615 Matn2-206ENSMUST00000228570 2798 ntBASIC13.23□□□□□ -0.29
Hoxb9P20615 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hoxb9P20615 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13.23□□□□□ -0.29
Hoxb9P20615 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Hoxb9P20615 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hoxb9P20615 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hoxb9P20615 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hoxb9P20615 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hoxb9P20615 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxb9P20615 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxb9P20615 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxb9P20615 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxb9P20615 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Hoxb9P20615 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxb9P20615 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxb9P20615 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxb9P20615 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
Hoxb9P20615 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxb9P20615 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxb9P20615 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxb9P20615 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.22□□□□□ -0.29
Hoxb9P20615 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC13.22□□□□□ -0.29
Hoxb9P20615 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxb9P20615 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxb9P20615 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxb9P20615 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC13.22□□□□□ -0.29
Hoxb9P20615 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxb9P20615 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Hoxb9P20615 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxb9P20615 Gm21854-201ENSMUST00000179901 471 ntBASIC13.22□□□□□ -0.29
Hoxb9P20615 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxb9P20615 Gm29667-201ENSMUST00000190817 490 ntBASIC13.22□□□□□ -0.29
Hoxb9P20615 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxb9P20615 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Hoxb9P20615 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxb9P20615 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxb9P20615 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.22□□□□□ -0.29
Hoxb9P20615 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
Hoxb9P20615 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxb9P20615 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxb9P20615 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.22□□□□□ -0.29
Hoxb9P20615 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxb9P20615 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Hoxb9P20615 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxb9P20615 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxb9P20615 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxb9P20615 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxb9P20615 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxb9P20615 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxb9P20615 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxb9P20615 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Hoxb9P20615 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Hoxb9P20615 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxb9P20615 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Hoxb9P20615 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxb9P20615 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxb9P20615 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxb9P20615 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxb9P20615 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxb9P20615 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.21□□□□□ -0.29
Hoxb9P20615 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxb9P20615 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
Hoxb9P20615 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxb9P20615 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxb9P20615 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxb9P20615 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxb9P20615 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxb9P20615 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Hoxb9P20615 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Hoxb9P20615 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxb9P20615 Gm9522-201ENSMUST00000182394 926 ntBASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms