Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hoxb3P09026 Gm12566-201ENSMUST00000121479 359 ntBASIC13.75□□□□□ -0.21
Hoxb3P09026 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Hoxb3P09026 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Hoxb3P09026 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC13.75□□□□□ -0.21
Hoxb3P09026 Gm38002-201ENSMUST00000193255 180 ntBASIC13.75□□□□□ -0.21
Hoxb3P09026 D9Wsu149-201ENSMUST00000214169 594 ntBASIC13.75□□□□□ -0.21
Hoxb3P09026 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hoxb3P09026 Il2-201ENSMUST00000029275 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hoxb3P09026 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hoxb3P09026 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Hoxb3P09026 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hoxb3P09026 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hoxb3P09026 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hoxb3P09026 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hoxb3P09026 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.75□□□□□ -0.21
Hoxb3P09026 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Hoxb3P09026 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hoxb3P09026 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hoxb3P09026 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hoxb3P09026 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC13.75□□□□□ -0.21
Hoxb3P09026 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Hoxb3P09026 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hoxb3P09026 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hoxb3P09026 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC13.75□□□□□ -0.21
Hoxb3P09026 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hoxb3P09026 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Hoxb3P09026 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hoxb3P09026 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hoxb3P09026 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC13.74□□□□□ -0.21
Hoxb3P09026 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hoxb3P09026 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hoxb3P09026 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Hoxb3P09026 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.74□□□□□ -0.21
Hoxb3P09026 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hoxb3P09026 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Hoxb3P09026 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Hoxb3P09026 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hoxb3P09026 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.74□□□□□ -0.21
Hoxb3P09026 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Hoxb3P09026 Gm17376-201ENSMUST00000166016 84 ntBASIC13.74□□□□□ -0.21
Hoxb3P09026 Gm27320-201ENSMUST00000184892 109 ntBASIC13.74□□□□□ -0.21
Hoxb3P09026 Gm6334-201ENSMUST00000207083 228 ntBASIC13.74□□□□□ -0.21
Hoxb3P09026 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hoxb3P09026 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Hoxb3P09026 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Hoxb3P09026 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hoxb3P09026 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hoxb3P09026 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hoxb3P09026 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hoxb3P09026 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Hoxb3P09026 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hoxb3P09026 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hoxb3P09026 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hoxb3P09026 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Hoxb3P09026 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.74□□□□□ -0.21
Hoxb3P09026 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hoxb3P09026 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hoxb3P09026 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hoxb3P09026 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Hoxb3P09026 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hoxb3P09026 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Hoxb3P09026 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hoxb3P09026 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hoxb3P09026 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.73□□□□□ -0.21
Hoxb3P09026 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Hoxb3P09026 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hoxb3P09026 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Hoxb3P09026 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Hoxb3P09026 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hoxb3P09026 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hoxb3P09026 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Hoxb3P09026 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC13.73□□□□□ -0.21
Hoxb3P09026 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC13.73□□□□□ -0.21
Hoxb3P09026 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Hoxb3P09026 Gm21147-201ENSMUST00000186046 913 ntBASIC13.73□□□□□ -0.21
Hoxb3P09026 Gm7558-201ENSMUST00000193221 1165 ntBASIC13.73□□□□□ -0.21
Hoxb3P09026 Gm43037-201ENSMUST00000196808 250 ntBASIC13.73□□□□□ -0.21
Hoxb3P09026 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC13.73□□□□□ -0.21
Hoxb3P09026 Gm45865-201ENSMUST00000211815 945 ntBASIC13.73□□□□□ -0.21
Hoxb3P09026 Gm5425-201ENSMUST00000214125 459 ntBASIC13.73□□□□□ -0.21
Hoxb3P09026 AC155266.1-201ENSMUST00000220762 904 ntBASIC13.73□□□□□ -0.21
Hoxb3P09026 AC140209.1-201ENSMUST00000227875 284 ntBASIC13.73□□□□□ -0.21
Hoxb3P09026 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hoxb3P09026 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hoxb3P09026 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hoxb3P09026 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hoxb3P09026 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hoxb3P09026 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hoxb3P09026 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Hoxb3P09026 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hoxb3P09026 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Hoxb3P09026 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hoxb3P09026 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Hoxb3P09026 AC162938.1-201ENSMUST00000213140 2323 ntBASIC13.73□□□□□ -0.21
Hoxb3P09026 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Hoxb3P09026 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.73□□□□□ -0.21
Hoxb3P09026 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hoxb3P09026 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hoxb3P09026 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms