Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Col4a1P02463 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Col4a1P02463 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col4a1P02463 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col4a1P02463 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Col4a1P02463 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col4a1P02463 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
Col4a1P02463 Gm5637-201ENSMUST00000153890 1119 ntBASIC16.69■□□□□ 0.26
Col4a1P02463 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC16.69■□□□□ 0.26
Col4a1P02463 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Col4a1P02463 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC16.69■□□□□ 0.26
Col4a1P02463 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col4a1P02463 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col4a1P02463 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col4a1P02463 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col4a1P02463 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Col4a1P02463 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col4a1P02463 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col4a1P02463 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col4a1P02463 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Col4a1P02463 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col4a1P02463 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col4a1P02463 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col4a1P02463 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
Col4a1P02463 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col4a1P02463 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC16.68■□□□□ 0.26
Col4a1P02463 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Col4a1P02463 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Col4a1P02463 Gm17376-201ENSMUST00000166016 84 ntBASIC16.68■□□□□ 0.26
Col4a1P02463 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC16.68■□□□□ 0.26
Col4a1P02463 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC16.68■□□□□ 0.26
Col4a1P02463 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
Col4a1P02463 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC16.68■□□□□ 0.26
Col4a1P02463 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Col4a1P02463 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col4a1P02463 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col4a1P02463 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Col4a1P02463 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Col4a1P02463 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Col4a1P02463 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col4a1P02463 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col4a1P02463 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col4a1P02463 Tmed9-203ENSMUST00000224741 1450 ntBASIC16.67■□□□□ 0.26
Col4a1P02463 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col4a1P02463 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col4a1P02463 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col4a1P02463 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Col4a1P02463 Gm43579-201ENSMUST00000202387 1307 ntBASIC16.67■□□□□ 0.26
Col4a1P02463 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col4a1P02463 Gm12749-201ENSMUST00000122138 1159 ntBASIC16.67■□□□□ 0.26
Col4a1P02463 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC16.67■□□□□ 0.26
Col4a1P02463 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
Col4a1P02463 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC16.67■□□□□ 0.26
Col4a1P02463 Gm9176-201ENSMUST00000219955 1120 ntBASIC16.67■□□□□ 0.26
Col4a1P02463 Gm7046-201ENSMUST00000221351 977 ntBASIC16.67■□□□□ 0.26
Col4a1P02463 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col4a1P02463 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Col4a1P02463 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col4a1P02463 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Col4a1P02463 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col4a1P02463 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col4a1P02463 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col4a1P02463 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Col4a1P02463 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Col4a1P02463 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col4a1P02463 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Col4a1P02463 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.66■□□□□ 0.26
Col4a1P02463 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col4a1P02463 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col4a1P02463 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col4a1P02463 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col4a1P02463 Gm15370-201ENSMUST00000117158 253 ntBASIC16.66■□□□□ 0.26
Col4a1P02463 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC16.66■□□□□ 0.26
Col4a1P02463 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC16.66■□□□□ 0.26
Col4a1P02463 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC16.66■□□□□ 0.26
Col4a1P02463 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Col4a1P02463 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col4a1P02463 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col4a1P02463 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Col4a1P02463 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col4a1P02463 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col4a1P02463 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC16.66■□□□□ 0.26
Col4a1P02463 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col4a1P02463 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col4a1P02463 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC16.65■□□□□ 0.26
Col4a1P02463 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col4a1P02463 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC16.65■□□□□ 0.26
Col4a1P02463 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col4a1P02463 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col4a1P02463 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Col4a1P02463 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col4a1P02463 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col4a1P02463 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col4a1P02463 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Col4a1P02463 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col4a1P02463 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col4a1P02463 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Col4a1P02463 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col4a1P02463 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Col4a1P02463 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms