Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CcnkO88874 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.34□□□□□ -0.43
CcnkO88874 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CcnkO88874 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC12.34□□□□□ -0.43
CcnkO88874 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
CcnkO88874 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
CcnkO88874 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CcnkO88874 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CcnkO88874 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CcnkO88874 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CcnkO88874 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CcnkO88874 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
CcnkO88874 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC12.34□□□□□ -0.43
CcnkO88874 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
CcnkO88874 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.34□□□□□ -0.43
CcnkO88874 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CcnkO88874 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CcnkO88874 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CcnkO88874 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.33□□□□□ -0.44
CcnkO88874 AC126250.1-201ENSMUST00000228343 1768 ntBASIC12.33□□□□□ -0.44
CcnkO88874 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
CcnkO88874 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC12.33□□□□□ -0.44
CcnkO88874 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CcnkO88874 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
CcnkO88874 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
CcnkO88874 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
CcnkO88874 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
CcnkO88874 Gm15427-201ENSMUST00000117288 531 ntBASIC12.33□□□□□ -0.44
CcnkO88874 Gm15467-201ENSMUST00000120582 445 ntBASIC12.33□□□□□ -0.44
CcnkO88874 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC12.33□□□□□ -0.44
CcnkO88874 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CcnkO88874 Rpph1-201ENSMUST00000175096 319 ntBASIC12.33□□□□□ -0.44
CcnkO88874 Gm4691-201ENSMUST00000182339 1000 ntBASIC12.33□□□□□ -0.44
CcnkO88874 Gm2451-201ENSMUST00000199447 999 ntBASIC12.33□□□□□ -0.44
CcnkO88874 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CcnkO88874 Gm10290-201ENSMUST00000200451 999 ntBASIC12.33□□□□□ -0.44
CcnkO88874 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CcnkO88874 CT025555.1-201ENSMUST00000225901 1217 ntBASIC12.33□□□□□ -0.44
CcnkO88874 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CcnkO88874 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CcnkO88874 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CcnkO88874 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CcnkO88874 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CcnkO88874 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CcnkO88874 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CcnkO88874 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CcnkO88874 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CcnkO88874 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CcnkO88874 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CcnkO88874 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CcnkO88874 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC12.33□□□□□ -0.44
CcnkO88874 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CcnkO88874 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CcnkO88874 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CcnkO88874 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC12.33□□□□□ -0.44
CcnkO88874 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CcnkO88874 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CcnkO88874 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CcnkO88874 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.33□□□□□ -0.44
CcnkO88874 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
CcnkO88874 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CcnkO88874 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
CcnkO88874 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CcnkO88874 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CcnkO88874 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CcnkO88874 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
CcnkO88874 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
CcnkO88874 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CcnkO88874 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CcnkO88874 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC12.32□□□□□ -0.44
CcnkO88874 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
CcnkO88874 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
CcnkO88874 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CcnkO88874 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
CcnkO88874 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CcnkO88874 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.32□□□□□ -0.44
CcnkO88874 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CcnkO88874 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CcnkO88874 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
CcnkO88874 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CcnkO88874 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CcnkO88874 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
CcnkO88874 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CcnkO88874 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC12.32□□□□□ -0.44
CcnkO88874 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CcnkO88874 Gm11779-201ENSMUST00000118541 368 ntBASIC12.32□□□□□ -0.44
CcnkO88874 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
CcnkO88874 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC12.32□□□□□ -0.44
CcnkO88874 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC12.32□□□□□ -0.44
CcnkO88874 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CcnkO88874 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
CcnkO88874 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CcnkO88874 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CcnkO88874 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CcnkO88874 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CcnkO88874 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
CcnkO88874 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CcnkO88874 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CcnkO88874 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CcnkO88874 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms