Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Gm12033-201ENSMUST00000180654 1002 ntBASIC16.82■□□□□ 0.28
Cops6O88545 Gm5559-201ENSMUST00000180755 1002 ntBASIC16.82■□□□□ 0.28
Cops6O88545 Gm4335-201ENSMUST00000182581 1004 ntBASIC16.82■□□□□ 0.28
Cops6O88545 Gm40466-201ENSMUST00000212174 422 ntBASIC16.82■□□□□ 0.28
Cops6O88545 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cops6O88545 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cops6O88545 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cops6O88545 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cops6O88545 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cops6O88545 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cops6O88545 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cops6O88545 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cops6O88545 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cops6O88545 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Cops6O88545 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cops6O88545 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cops6O88545 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cops6O88545 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cops6O88545 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC16.81■□□□□ 0.28
Cops6O88545 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Cops6O88545 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cops6O88545 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cops6O88545 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cops6O88545 Gm16177-201ENSMUST00000120728 718 ntBASIC16.81■□□□□ 0.28
Cops6O88545 Trav4d-2-201ENSMUST00000120914 335 ntBASIC16.81■□□□□ 0.28
Cops6O88545 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC16.81■□□□□ 0.28
Cops6O88545 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC16.81■□□□□ 0.28
Cops6O88545 Gm38144-201ENSMUST00000192790 465 ntBASIC16.81■□□□□ 0.28
Cops6O88545 AC155237.1-201ENSMUST00000226196 1279 ntBASIC16.81■□□□□ 0.28
Cops6O88545 Itm2b-204ENSMUST00000228637 783 ntBASIC16.81■□□□□ 0.28
Cops6O88545 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cops6O88545 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC16.81■□□□□ 0.28
Cops6O88545 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cops6O88545 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cops6O88545 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cops6O88545 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cops6O88545 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC16.81■□□□□ 0.28
Cops6O88545 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cops6O88545 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cops6O88545 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cops6O88545 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC16.8■□□□□ 0.28
Cops6O88545 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cops6O88545 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cops6O88545 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cops6O88545 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Cops6O88545 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cops6O88545 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
Cops6O88545 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Cops6O88545 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cops6O88545 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cops6O88545 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cops6O88545 Gm10156-201ENSMUST00000122364 462 ntBASIC16.8■□□□□ 0.28
Cops6O88545 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC16.8■□□□□ 0.28
Cops6O88545 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
Cops6O88545 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC16.8■□□□□ 0.28
Cops6O88545 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cops6O88545 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cops6O88545 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cops6O88545 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cops6O88545 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cops6O88545 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cops6O88545 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cops6O88545 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cops6O88545 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC16.79■□□□□ 0.28
Cops6O88545 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cops6O88545 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cops6O88545 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cops6O88545 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cops6O88545 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cops6O88545 Gm12384-201ENSMUST00000119228 919 ntBASIC16.79■□□□□ 0.28
Cops6O88545 Mir6420-201ENSMUST00000185032 102 ntBASIC16.79■□□□□ 0.28
Cops6O88545 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC16.79■□□□□ 0.28
Cops6O88545 Gm43818-201ENSMUST00000200605 466 ntBASIC16.79■□□□□ 0.28
Cops6O88545 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cops6O88545 AC126253.1-201ENSMUST00000227974 824 ntBASIC16.79■□□□□ 0.28
Cops6O88545 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cops6O88545 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cops6O88545 Rn7sk-201ENSMUST00000083103 331 ntBASIC16.79■□□□□ 0.28
Cops6O88545 Gm26315-201ENSMUST00000083890 321 ntBASIC16.79■□□□□ 0.28
Cops6O88545 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cops6O88545 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cops6O88545 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cops6O88545 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Cops6O88545 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cops6O88545 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Cops6O88545 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC16.79■□□□□ 0.28
Cops6O88545 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cops6O88545 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cops6O88545 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cops6O88545 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cops6O88545 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cops6O88545 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cops6O88545 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cops6O88545 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cops6O88545 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cops6O88545 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cops6O88545 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cops6O88545 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
Cops6O88545 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
Cops6O88545 Gm8565-201ENSMUST00000183259 1014 ntBASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms