Protein–RNA interactions for Protein: O88271

Cfdp1, Craniofacial development protein 1, mousemouse

Known RBP Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfdp1O88271 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC17.22■□□□□ 0.35
Cfdp1O88271 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cfdp1O88271 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cfdp1O88271 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cfdp1O88271 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cfdp1O88271 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cfdp1O88271 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cfdp1O88271 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cfdp1O88271 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cfdp1O88271 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cfdp1O88271 Gm13859-201ENSMUST00000119936 1423 ntBASIC17.21■□□□□ 0.35
Cfdp1O88271 Gm8337-201ENSMUST00000187358 1938 ntBASIC17.21■□□□□ 0.35
Cfdp1O88271 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cfdp1O88271 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cfdp1O88271 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cfdp1O88271 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cfdp1O88271 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cfdp1O88271 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cfdp1O88271 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cfdp1O88271 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cfdp1O88271 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC17.21■□□□□ 0.35
Cfdp1O88271 Gm15678-201ENSMUST00000117573 960 ntBASIC17.21■□□□□ 0.35
Cfdp1O88271 Gm11524-201ENSMUST00000119349 807 ntBASIC17.21■□□□□ 0.35
Cfdp1O88271 Gm11918-201ENSMUST00000121660 179 ntBASIC17.21■□□□□ 0.35
Cfdp1O88271 Gm15376-201ENSMUST00000122258 783 ntBASIC17.21■□□□□ 0.35
Cfdp1O88271 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC17.21■□□□□ 0.35
Cfdp1O88271 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cfdp1O88271 Gm2445-201ENSMUST00000182798 989 ntBASIC17.21■□□□□ 0.35
Cfdp1O88271 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cfdp1O88271 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC17.21■□□□□ 0.35
Cfdp1O88271 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC17.21■□□□□ 0.35
Cfdp1O88271 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cfdp1O88271 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC17.21■□□□□ 0.35
Cfdp1O88271 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cfdp1O88271 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cfdp1O88271 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cfdp1O88271 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
Cfdp1O88271 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Cfdp1O88271 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cfdp1O88271 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cfdp1O88271 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cfdp1O88271 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cfdp1O88271 AC161252.3-201ENSMUST00000225465 1549 ntBASIC17.21■□□□□ 0.34
Cfdp1O88271 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Cfdp1O88271 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Cfdp1O88271 AC168058.1-201ENSMUST00000219521 2282 ntBASIC17.21■□□□□ 0.34
Cfdp1O88271 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cfdp1O88271 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cfdp1O88271 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cfdp1O88271 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cfdp1O88271 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cfdp1O88271 Gm26513-201ENSMUST00000181802 2489 ntBASIC17.2■□□□□ 0.34
Cfdp1O88271 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Cfdp1O88271 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC17.2■□□□□ 0.34
Cfdp1O88271 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cfdp1O88271 Ighv5-13-201ENSMUST00000193550 290 ntBASIC17.2■□□□□ 0.34
Cfdp1O88271 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cfdp1O88271 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Cfdp1O88271 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC17.2■□□□□ 0.34
Cfdp1O88271 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cfdp1O88271 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Cfdp1O88271 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cfdp1O88271 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cfdp1O88271 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cfdp1O88271 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cfdp1O88271 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cfdp1O88271 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC17.2■□□□□ 0.34
Cfdp1O88271 Gm15163-201ENSMUST00000120749 1302 ntBASIC17.2■□□□□ 0.34
Cfdp1O88271 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cfdp1O88271 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cfdp1O88271 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cfdp1O88271 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cfdp1O88271 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cfdp1O88271 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cfdp1O88271 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Cfdp1O88271 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC17.19■□□□□ 0.34
Cfdp1O88271 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Cfdp1O88271 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cfdp1O88271 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cfdp1O88271 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cfdp1O88271 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cfdp1O88271 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cfdp1O88271 Gm14730-201ENSMUST00000122378 1045 ntBASIC17.19■□□□□ 0.34
Cfdp1O88271 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC17.19■□□□□ 0.34
Cfdp1O88271 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC17.19■□□□□ 0.34
Cfdp1O88271 Gm7498-201ENSMUST00000203282 1084 ntBASIC17.19■□□□□ 0.34
Cfdp1O88271 Gm5186-201ENSMUST00000218781 920 ntBASIC17.19■□□□□ 0.34
Cfdp1O88271 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC17.19■□□□□ 0.34
Cfdp1O88271 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cfdp1O88271 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cfdp1O88271 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cfdp1O88271 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Cfdp1O88271 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Cfdp1O88271 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cfdp1O88271 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Cfdp1O88271 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cfdp1O88271 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Cfdp1O88271 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cfdp1O88271 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cfdp1O88271 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms