Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trdmt1O55055 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trdmt1O55055 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC15.16■□□□□ 0.02
Trdmt1O55055 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Trdmt1O55055 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trdmt1O55055 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC15.16■□□□□ 0.02
Trdmt1O55055 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC15.16■□□□□ 0.02
Trdmt1O55055 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Trdmt1O55055 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC15.15■□□□□ 0.02
Trdmt1O55055 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC15.15■□□□□ 0.02
Trdmt1O55055 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trdmt1O55055 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trdmt1O55055 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trdmt1O55055 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trdmt1O55055 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trdmt1O55055 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Trdmt1O55055 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trdmt1O55055 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trdmt1O55055 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trdmt1O55055 AC154276.1-201ENSMUST00000228874 1299 ntBASIC15.15■□□□□ 0.02
Trdmt1O55055 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trdmt1O55055 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trdmt1O55055 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trdmt1O55055 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trdmt1O55055 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trdmt1O55055 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trdmt1O55055 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC15.15■□□□□ 0.02
Trdmt1O55055 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Trdmt1O55055 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Trdmt1O55055 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trdmt1O55055 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trdmt1O55055 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trdmt1O55055 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trdmt1O55055 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Trdmt1O55055 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trdmt1O55055 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trdmt1O55055 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trdmt1O55055 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC15.15■□□□□ 0.02
Trdmt1O55055 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Trdmt1O55055 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trdmt1O55055 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.02
Trdmt1O55055 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trdmt1O55055 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Trdmt1O55055 Gm37912-201ENSMUST00000191895 3076 ntBASIC15.14■□□□□ 0.01
Trdmt1O55055 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Trdmt1O55055 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC15.14■□□□□ 0.01
Trdmt1O55055 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trdmt1O55055 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trdmt1O55055 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trdmt1O55055 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trdmt1O55055 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Trdmt1O55055 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trdmt1O55055 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC15.14■□□□□ 0.01
Trdmt1O55055 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trdmt1O55055 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trdmt1O55055 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trdmt1O55055 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Trdmt1O55055 Gm22018-201ENSMUST00000104357 131 ntBASIC15.14■□□□□ 0.01
Trdmt1O55055 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trdmt1O55055 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC15.14■□□□□ 0.01
Trdmt1O55055 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trdmt1O55055 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trdmt1O55055 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trdmt1O55055 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trdmt1O55055 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trdmt1O55055 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trdmt1O55055 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC15.14■□□□□ 0.01
Trdmt1O55055 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trdmt1O55055 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trdmt1O55055 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trdmt1O55055 Gm38058-201ENSMUST00000194323 4368 ntBASIC15.14■□□□□ 0.01
Trdmt1O55055 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trdmt1O55055 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trdmt1O55055 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trdmt1O55055 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trdmt1O55055 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trdmt1O55055 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
Trdmt1O55055 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trdmt1O55055 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trdmt1O55055 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trdmt1O55055 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trdmt1O55055 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trdmt1O55055 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trdmt1O55055 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trdmt1O55055 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trdmt1O55055 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC15.13■□□□□ 0.01
Trdmt1O55055 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC15.13■□□□□ 0.01
Trdmt1O55055 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
Trdmt1O55055 Gm13886-201ENSMUST00000117876 1183 ntBASIC15.13■□□□□ 0.01
Trdmt1O55055 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trdmt1O55055 Gm13369-201ENSMUST00000119442 987 ntBASIC15.13■□□□□ 0.01
Trdmt1O55055 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trdmt1O55055 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC15.13■□□□□ 0.01
Trdmt1O55055 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trdmt1O55055 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trdmt1O55055 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Trdmt1O55055 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Trdmt1O55055 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Trdmt1O55055 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Trdmt1O55055 Gm38002-201ENSMUST00000193255 180 ntBASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms