Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Matn3O35701 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Matn3O35701 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Matn3O35701 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Matn3O35701 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Matn3O35701 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Matn3O35701 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Matn3O35701 Best4-ps-201ENSMUST00000129783 1380 ntBASIC12.56□□□□□ -0.4
Matn3O35701 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Matn3O35701 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Matn3O35701 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Matn3O35701 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Matn3O35701 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Matn3O35701 Gm13418-201ENSMUST00000119097 944 ntBASIC12.56□□□□□ -0.4
Matn3O35701 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Matn3O35701 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Matn3O35701 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Matn3O35701 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Matn3O35701 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Matn3O35701 Gm7787-201ENSMUST00000216858 688 ntBASIC12.56□□□□□ -0.4
Matn3O35701 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Matn3O35701 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Matn3O35701 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Matn3O35701 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Matn3O35701 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Matn3O35701 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Matn3O35701 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Matn3O35701 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Matn3O35701 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Matn3O35701 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Matn3O35701 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Matn3O35701 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Matn3O35701 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Matn3O35701 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Matn3O35701 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.55□□□□□ -0.4
Matn3O35701 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Matn3O35701 AC154527.4-201ENSMUST00000224364 1667 ntBASIC12.55□□□□□ -0.4
Matn3O35701 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Matn3O35701 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.55□□□□□ -0.4
Matn3O35701 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Matn3O35701 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Matn3O35701 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC12.55□□□□□ -0.4
Matn3O35701 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC12.55□□□□□ -0.4
Matn3O35701 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Matn3O35701 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Matn3O35701 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC12.55□□□□□ -0.4
Matn3O35701 Gm45098-201ENSMUST00000207179 657 ntBASIC12.55□□□□□ -0.4
Matn3O35701 Gm5364-201ENSMUST00000216789 889 ntBASIC12.55□□□□□ -0.4
Matn3O35701 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC12.55□□□□□ -0.4
Matn3O35701 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Matn3O35701 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Matn3O35701 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Matn3O35701 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Matn3O35701 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Matn3O35701 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Matn3O35701 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Matn3O35701 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Matn3O35701 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.55□□□□□ -0.4
Matn3O35701 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Matn3O35701 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Matn3O35701 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Matn3O35701 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Matn3O35701 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Matn3O35701 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Matn3O35701 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Matn3O35701 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Matn3O35701 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Matn3O35701 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Matn3O35701 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Matn3O35701 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Matn3O35701 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.54□□□□□ -0.4
Matn3O35701 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.54□□□□□ -0.4
Matn3O35701 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Matn3O35701 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Matn3O35701 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Matn3O35701 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Matn3O35701 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Matn3O35701 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Matn3O35701 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Matn3O35701 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Matn3O35701 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Matn3O35701 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Matn3O35701 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Matn3O35701 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Matn3O35701 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Matn3O35701 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Matn3O35701 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC12.54□□□□□ -0.4
Matn3O35701 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC12.54□□□□□ -0.4
Matn3O35701 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC12.54□□□□□ -0.4
Matn3O35701 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Matn3O35701 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Matn3O35701 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Matn3O35701 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Matn3O35701 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Matn3O35701 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Matn3O35701 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Matn3O35701 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Matn3O35701 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Matn3O35701 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Matn3O35701 Gm3928-201ENSMUST00000121141 1307 ntBASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms