Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Gm9727-201ENSMUST00000161387 555 ntBASIC15.55■□□□□ 0.08
Stx1aO35526 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Stx1aO35526 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Stx1aO35526 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Stx1aO35526 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
Stx1aO35526 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Stx1aO35526 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Stx1aO35526 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
Stx1aO35526 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
Stx1aO35526 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Stx1aO35526 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Stx1aO35526 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Stx1aO35526 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Stx1aO35526 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Stx1aO35526 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Stx1aO35526 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Stx1aO35526 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Stx1aO35526 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Stx1aO35526 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Stx1aO35526 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Stx1aO35526 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Stx1aO35526 Ankra2-208ENSMUST00000226100 1476 ntBASIC15.54■□□□□ 0.08
Stx1aO35526 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Stx1aO35526 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC15.54■□□□□ 0.08
Stx1aO35526 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Stx1aO35526 AC131586.3-201ENSMUST00000228355 1367 ntBASIC15.54■□□□□ 0.08
Stx1aO35526 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Stx1aO35526 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Stx1aO35526 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Stx1aO35526 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Stx1aO35526 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC15.54■□□□□ 0.08
Stx1aO35526 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Stx1aO35526 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Stx1aO35526 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Stx1aO35526 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC15.54■□□□□ 0.08
Stx1aO35526 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC15.54■□□□□ 0.08
Stx1aO35526 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Stx1aO35526 Gm44719-201ENSMUST00000206404 149 ntBASIC15.54■□□□□ 0.08
Stx1aO35526 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Stx1aO35526 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Stx1aO35526 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Stx1aO35526 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Stx1aO35526 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Stx1aO35526 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Stx1aO35526 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Stx1aO35526 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Stx1aO35526 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Stx1aO35526 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Stx1aO35526 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC15.54■□□□□ 0.08
Stx1aO35526 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC15.54■□□□□ 0.08
Stx1aO35526 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC15.54■□□□□ 0.08
Stx1aO35526 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Stx1aO35526 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Stx1aO35526 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Stx1aO35526 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Stx1aO35526 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Stx1aO35526 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Stx1aO35526 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Stx1aO35526 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Stx1aO35526 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Stx1aO35526 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC15.53■□□□□ 0.08
Stx1aO35526 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Stx1aO35526 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Stx1aO35526 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Stx1aO35526 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Stx1aO35526 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
Stx1aO35526 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC15.53■□□□□ 0.08
Stx1aO35526 Gm18027-201ENSMUST00000218947 619 ntBASIC15.53■□□□□ 0.08
Stx1aO35526 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Stx1aO35526 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Stx1aO35526 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Stx1aO35526 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Stx1aO35526 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Stx1aO35526 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Stx1aO35526 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Stx1aO35526 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Stx1aO35526 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Stx1aO35526 Gm45751-201ENSMUST00000210185 1573 ntBASIC15.53■□□□□ 0.08
Stx1aO35526 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC15.53■□□□□ 0.08
Stx1aO35526 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Stx1aO35526 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Stx1aO35526 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Stx1aO35526 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Stx1aO35526 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
Stx1aO35526 Gm7899-201ENSMUST00000192935 1897 ntBASIC15.52■□□□□ 0.08
Stx1aO35526 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Stx1aO35526 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Stx1aO35526 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Stx1aO35526 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Stx1aO35526 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC15.52■□□□□ 0.08
Stx1aO35526 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Stx1aO35526 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Stx1aO35526 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Stx1aO35526 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Stx1aO35526 Gm10327-201ENSMUST00000105222 1002 ntBASIC15.52■□□□□ 0.08
Stx1aO35526 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC15.52■□□□□ 0.08
Stx1aO35526 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC15.52■□□□□ 0.08
Stx1aO35526 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC15.52■□□□□ 0.08
Stx1aO35526 Mir8117-201ENSMUST00000184773 107 ntBASIC15.52■□□□□ 0.08
Stx1aO35526 Gm5069-202ENSMUST00000192714 1011 ntBASIC15.52■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms