Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col15a1O35206 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col15a1O35206 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col15a1O35206 Gm12500-202ENSMUST00000186471 2428 ntBASIC17.54■□□□□ 0.4
Col15a1O35206 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col15a1O35206 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC17.54■□□□□ 0.4
Col15a1O35206 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col15a1O35206 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col15a1O35206 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col15a1O35206 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col15a1O35206 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Col15a1O35206 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Col15a1O35206 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Col15a1O35206 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col15a1O35206 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Col15a1O35206 Gm8805-201ENSMUST00000117848 313 ntBASIC17.53■□□□□ 0.4
Col15a1O35206 Gm6447-201ENSMUST00000118905 835 ntBASIC17.53■□□□□ 0.4
Col15a1O35206 Gm15808-201ENSMUST00000119046 604 ntBASIC17.53■□□□□ 0.4
Col15a1O35206 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Col15a1O35206 Gm16379-201ENSMUST00000161469 348 ntBASIC17.53■□□□□ 0.4
Col15a1O35206 Gm8762-201ENSMUST00000193486 339 ntBASIC17.53■□□□□ 0.4
Col15a1O35206 AC134254.1-201ENSMUST00000221362 167 ntBASIC17.53■□□□□ 0.4
Col15a1O35206 Gm16372-201ENSMUST00000073088 450 ntBASIC17.53■□□□□ 0.4
Col15a1O35206 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col15a1O35206 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Col15a1O35206 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col15a1O35206 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Col15a1O35206 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC17.53■□□□□ 0.4
Col15a1O35206 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Col15a1O35206 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
Col15a1O35206 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col15a1O35206 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Col15a1O35206 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col15a1O35206 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col15a1O35206 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col15a1O35206 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC17.53■□□□□ 0.4
Col15a1O35206 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col15a1O35206 Gm12241-201ENSMUST00000118330 726 ntBASIC17.53■□□□□ 0.4
Col15a1O35206 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Col15a1O35206 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC17.53■□□□□ 0.4
Col15a1O35206 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col15a1O35206 AC173210.1-201ENSMUST00000222341 1131 ntBASIC17.53■□□□□ 0.4
Col15a1O35206 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col15a1O35206 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col15a1O35206 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col15a1O35206 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Col15a1O35206 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Col15a1O35206 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col15a1O35206 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col15a1O35206 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col15a1O35206 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Col15a1O35206 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Col15a1O35206 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
Col15a1O35206 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Col15a1O35206 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC17.52■□□□□ 0.39
Col15a1O35206 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Col15a1O35206 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Col15a1O35206 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC17.52■□□□□ 0.39
Col15a1O35206 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Col15a1O35206 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Col15a1O35206 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Col15a1O35206 Gm26083-201ENSMUST00000157904 193 ntBASIC17.52■□□□□ 0.39
Col15a1O35206 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC17.52■□□□□ 0.39
Col15a1O35206 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Col15a1O35206 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC17.52■□□□□ 0.39
Col15a1O35206 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Col15a1O35206 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Col15a1O35206 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Col15a1O35206 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Col15a1O35206 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Col15a1O35206 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Col15a1O35206 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Col15a1O35206 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col15a1O35206 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col15a1O35206 Gm14608-201ENSMUST00000120030 1553 ntBASIC17.51■□□□□ 0.39
Col15a1O35206 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col15a1O35206 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Col15a1O35206 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Col15a1O35206 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Col15a1O35206 Gm38197-201ENSMUST00000192320 2122 ntBASIC17.51■□□□□ 0.39
Col15a1O35206 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col15a1O35206 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col15a1O35206 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC17.51■□□□□ 0.39
Col15a1O35206 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col15a1O35206 Gm24255-201ENSMUST00000104481 128 ntBASIC17.51■□□□□ 0.39
Col15a1O35206 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col15a1O35206 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC17.51■□□□□ 0.39
Col15a1O35206 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col15a1O35206 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC17.51■□□□□ 0.39
Col15a1O35206 Gm6621-201ENSMUST00000193251 772 ntBASIC17.51■□□□□ 0.39
Col15a1O35206 Gm7118-201ENSMUST00000200167 1003 ntBASIC17.51■□□□□ 0.39
Col15a1O35206 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col15a1O35206 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Col15a1O35206 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col15a1O35206 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col15a1O35206 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col15a1O35206 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col15a1O35206 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col15a1O35206 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC17.5■□□□□ 0.39
Col15a1O35206 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms