Protein–RNA interactions for Protein: O08583

Alyref, THO complex subunit 4, mousemouse

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AlyrefO08583 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
AlyrefO08583 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
AlyrefO08583 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
AlyrefO08583 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
AlyrefO08583 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
AlyrefO08583 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
AlyrefO08583 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
AlyrefO08583 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
AlyrefO08583 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
AlyrefO08583 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
AlyrefO08583 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
AlyrefO08583 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
AlyrefO08583 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
AlyrefO08583 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC14.02□□□□□ -0.17
AlyrefO08583 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC14.02□□□□□ -0.17
AlyrefO08583 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC14.02□□□□□ -0.17
AlyrefO08583 Gm5637-201ENSMUST00000153890 1119 ntBASIC14.02□□□□□ -0.17
AlyrefO08583 Gm4804-201ENSMUST00000182234 999 ntBASIC14.02□□□□□ -0.17
AlyrefO08583 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
AlyrefO08583 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC14.02□□□□□ -0.17
AlyrefO08583 Gm19208-201ENSMUST00000213861 912 ntBASIC14.02□□□□□ -0.17
AlyrefO08583 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
AlyrefO08583 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
AlyrefO08583 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
AlyrefO08583 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
AlyrefO08583 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
AlyrefO08583 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.02□□□□□ -0.17
AlyrefO08583 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
AlyrefO08583 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
AlyrefO08583 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
AlyrefO08583 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
AlyrefO08583 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AlyrefO08583 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
AlyrefO08583 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
AlyrefO08583 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
AlyrefO08583 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AlyrefO08583 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
AlyrefO08583 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC14.01□□□□□ -0.17
AlyrefO08583 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
AlyrefO08583 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
AlyrefO08583 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AlyrefO08583 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
AlyrefO08583 Gm20482-202ENSMUST00000174729 825 ntBASIC14.01□□□□□ -0.17
AlyrefO08583 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC14.01□□□□□ -0.17
AlyrefO08583 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC14.01□□□□□ -0.17
AlyrefO08583 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
AlyrefO08583 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
AlyrefO08583 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
AlyrefO08583 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
AlyrefO08583 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.01□□□□□ -0.17
AlyrefO08583 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
AlyrefO08583 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
AlyrefO08583 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AlyrefO08583 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AlyrefO08583 Gm13337-201ENSMUST00000119183 1594 ntBASIC14□□□□□ -0.17
AlyrefO08583 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
AlyrefO08583 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AlyrefO08583 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AlyrefO08583 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
AlyrefO08583 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AlyrefO08583 Camk2g-217ENSMUST00000226630 1937 ntBASIC14□□□□□ -0.17
AlyrefO08583 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
AlyrefO08583 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AlyrefO08583 Gm4909-201ENSMUST00000118749 794 ntBASIC14□□□□□ -0.17
AlyrefO08583 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14□□□□□ -0.17
AlyrefO08583 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC14□□□□□ -0.17
AlyrefO08583 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC14□□□□□ -0.17
AlyrefO08583 Gm43133-201ENSMUST00000197472 463 ntBASIC14□□□□□ -0.17
AlyrefO08583 Gm10608-202ENSMUST00000213924 676 ntBASIC14□□□□□ -0.17
AlyrefO08583 AC122876.1-201ENSMUST00000217619 825 ntBASIC14□□□□□ -0.17
AlyrefO08583 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AlyrefO08583 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AlyrefO08583 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AlyrefO08583 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
AlyrefO08583 Gm10339-203ENSMUST00000225409 1671 ntBASIC14□□□□□ -0.17
AlyrefO08583 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14□□□□□ -0.17
AlyrefO08583 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14□□□□□ -0.17
AlyrefO08583 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AlyrefO08583 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AlyrefO08583 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AlyrefO08583 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.99□□□□□ -0.17
AlyrefO08583 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
AlyrefO08583 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC13.99□□□□□ -0.17
AlyrefO08583 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AlyrefO08583 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AlyrefO08583 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC13.99□□□□□ -0.17
AlyrefO08583 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC13.99□□□□□ -0.17
AlyrefO08583 Gm2991-201ENSMUST00000173338 480 ntBASIC13.99□□□□□ -0.17
AlyrefO08583 Gm29396-201ENSMUST00000185659 716 ntBASIC13.99□□□□□ -0.17
AlyrefO08583 Gm5276-201ENSMUST00000196683 1047 ntBASIC13.99□□□□□ -0.17
AlyrefO08583 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
AlyrefO08583 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AlyrefO08583 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AlyrefO08583 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
AlyrefO08583 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AlyrefO08583 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AlyrefO08583 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
AlyrefO08583 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
AlyrefO08583 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
AlyrefO08583 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms