Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh1F7BJK1 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh1F7BJK1 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh1F7BJK1 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh1F7BJK1 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.46□□□□□ -0.41
Pcdh1F7BJK1 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh1F7BJK1 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
Pcdh1F7BJK1 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh1F7BJK1 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.46□□□□□ -0.41
Pcdh1F7BJK1 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh1F7BJK1 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh1F7BJK1 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh1F7BJK1 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh1F7BJK1 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC12.46□□□□□ -0.41
Pcdh1F7BJK1 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Pcdh1F7BJK1 Gm17271-201ENSMUST00000165535 355 ntBASIC12.46□□□□□ -0.41
Pcdh1F7BJK1 Mir3113-201ENSMUST00000175478 76 ntBASIC12.46□□□□□ -0.41
Pcdh1F7BJK1 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh1F7BJK1 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh1F7BJK1 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh1F7BJK1 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh1F7BJK1 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh1F7BJK1 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh1F7BJK1 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh1F7BJK1 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Pcdh1F7BJK1 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Pcdh1F7BJK1 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdh1F7BJK1 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdh1F7BJK1 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Pcdh1F7BJK1 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdh1F7BJK1 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Pcdh1F7BJK1 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdh1F7BJK1 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.46□□□□□ -0.42
Pcdh1F7BJK1 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Pcdh1F7BJK1 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
Pcdh1F7BJK1 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Pcdh1F7BJK1 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdh1F7BJK1 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.45□□□□□ -0.42
Pcdh1F7BJK1 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh1F7BJK1 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh1F7BJK1 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh1F7BJK1 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Pcdh1F7BJK1 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh1F7BJK1 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.45□□□□□ -0.42
Pcdh1F7BJK1 Gm42466-201ENSMUST00000202099 1301 ntBASIC12.45□□□□□ -0.42
Pcdh1F7BJK1 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh1F7BJK1 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh1F7BJK1 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh1F7BJK1 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.45□□□□□ -0.42
Pcdh1F7BJK1 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh1F7BJK1 Gm15467-201ENSMUST00000120582 445 ntBASIC12.45□□□□□ -0.42
Pcdh1F7BJK1 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh1F7BJK1 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC12.45□□□□□ -0.42
Pcdh1F7BJK1 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh1F7BJK1 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh1F7BJK1 Gm43514-201ENSMUST00000198852 424 ntBASIC12.45□□□□□ -0.42
Pcdh1F7BJK1 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Pcdh1F7BJK1 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC12.45□□□□□ -0.42
Pcdh1F7BJK1 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh1F7BJK1 AC166341.4-201ENSMUST00000220625 123 ntBASIC12.45□□□□□ -0.42
Pcdh1F7BJK1 AC090659.1-201ENSMUST00000224334 768 ntBASIC12.45□□□□□ -0.42
Pcdh1F7BJK1 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Pcdh1F7BJK1 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC12.45□□□□□ -0.42
Pcdh1F7BJK1 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Pcdh1F7BJK1 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh1F7BJK1 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh1F7BJK1 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh1F7BJK1 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh1F7BJK1 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh1F7BJK1 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Pcdh1F7BJK1 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh1F7BJK1 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh1F7BJK1 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh1F7BJK1 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh1F7BJK1 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.45□□□□□ -0.42
Pcdh1F7BJK1 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Pcdh1F7BJK1 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh1F7BJK1 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh1F7BJK1 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh1F7BJK1 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
Pcdh1F7BJK1 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.44□□□□□ -0.42
Pcdh1F7BJK1 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh1F7BJK1 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh1F7BJK1 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh1F7BJK1 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Pcdh1F7BJK1 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Pcdh1F7BJK1 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh1F7BJK1 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh1F7BJK1 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.44□□□□□ -0.42
Pcdh1F7BJK1 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC12.44□□□□□ -0.42
Pcdh1F7BJK1 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC12.44□□□□□ -0.42
Pcdh1F7BJK1 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC12.44□□□□□ -0.42
Pcdh1F7BJK1 Gm18737-201ENSMUST00000173594 937 ntBASIC12.44□□□□□ -0.42
Pcdh1F7BJK1 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.44□□□□□ -0.42
Pcdh1F7BJK1 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC12.44□□□□□ -0.42
Pcdh1F7BJK1 AC158529.1-201ENSMUST00000223618 239 ntBASIC12.44□□□□□ -0.42
Pcdh1F7BJK1 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh1F7BJK1 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh1F7BJK1 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh1F7BJK1 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms