Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ube4aE9Q735 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ube4aE9Q735 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC16.53■□□□□ 0.24
Ube4aE9Q735 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ube4aE9Q735 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ube4aE9Q735 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ube4aE9Q735 Dctn4-202ENSMUST00000223590 1530 ntBASIC16.53■□□□□ 0.24
Ube4aE9Q735 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ube4aE9Q735 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ube4aE9Q735 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ube4aE9Q735 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ube4aE9Q735 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ube4aE9Q735 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ube4aE9Q735 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ube4aE9Q735 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ube4aE9Q735 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ube4aE9Q735 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ube4aE9Q735 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ube4aE9Q735 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ube4aE9Q735 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC16.52■□□□□ 0.24
Ube4aE9Q735 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ube4aE9Q735 Gm5187-201ENSMUST00000117317 991 ntBASIC16.52■□□□□ 0.24
Ube4aE9Q735 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC16.52■□□□□ 0.24
Ube4aE9Q735 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC16.52■□□□□ 0.24
Ube4aE9Q735 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC16.52■□□□□ 0.24
Ube4aE9Q735 Gm45331-201ENSMUST00000209868 554 ntBASIC16.52■□□□□ 0.24
Ube4aE9Q735 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ube4aE9Q735 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Ube4aE9Q735 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ube4aE9Q735 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ube4aE9Q735 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ube4aE9Q735 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Ube4aE9Q735 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ube4aE9Q735 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Ube4aE9Q735 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Ube4aE9Q735 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC16.52■□□□□ 0.23
Ube4aE9Q735 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Ube4aE9Q735 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC16.52■□□□□ 0.23
Ube4aE9Q735 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Ube4aE9Q735 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ube4aE9Q735 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Ube4aE9Q735 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ube4aE9Q735 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ube4aE9Q735 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ube4aE9Q735 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
Ube4aE9Q735 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ube4aE9Q735 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ube4aE9Q735 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC16.51■□□□□ 0.23
Ube4aE9Q735 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ube4aE9Q735 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ube4aE9Q735 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ube4aE9Q735 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC16.51■□□□□ 0.23
Ube4aE9Q735 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ube4aE9Q735 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ube4aE9Q735 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC16.51■□□□□ 0.23
Ube4aE9Q735 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ube4aE9Q735 Gm12203-201ENSMUST00000118235 598 ntBASIC16.51■□□□□ 0.23
Ube4aE9Q735 Gm12209-201ENSMUST00000120089 596 ntBASIC16.51■□□□□ 0.23
Ube4aE9Q735 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Ube4aE9Q735 Mir6420-201ENSMUST00000185032 102 ntBASIC16.51■□□□□ 0.23
Ube4aE9Q735 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC16.51■□□□□ 0.23
Ube4aE9Q735 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC16.51■□□□□ 0.23
Ube4aE9Q735 Gm42929-201ENSMUST00000198374 1286 ntBASIC16.51■□□□□ 0.23
Ube4aE9Q735 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ube4aE9Q735 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC16.51■□□□□ 0.23
Ube4aE9Q735 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ube4aE9Q735 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Ube4aE9Q735 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ube4aE9Q735 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC16.51■□□□□ 0.23
Ube4aE9Q735 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC16.51■□□□□ 0.23
Ube4aE9Q735 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ube4aE9Q735 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
Ube4aE9Q735 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ube4aE9Q735 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ube4aE9Q735 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ube4aE9Q735 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ube4aE9Q735 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ube4aE9Q735 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC16.51■□□□□ 0.23
Ube4aE9Q735 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
Ube4aE9Q735 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Ube4aE9Q735 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ube4aE9Q735 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ube4aE9Q735 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ube4aE9Q735 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC16.5■□□□□ 0.23
Ube4aE9Q735 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ube4aE9Q735 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ube4aE9Q735 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ube4aE9Q735 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC16.5■□□□□ 0.23
Ube4aE9Q735 Gm2639-201ENSMUST00000156881 1297 ntBASIC16.5■□□□□ 0.23
Ube4aE9Q735 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC16.5■□□□□ 0.23
Ube4aE9Q735 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ube4aE9Q735 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ube4aE9Q735 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ube4aE9Q735 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ube4aE9Q735 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ube4aE9Q735 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ube4aE9Q735 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ube4aE9Q735 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC16.5■□□□□ 0.23
Ube4aE9Q735 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ube4aE9Q735 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms