Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb9E9Q5G2 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb9E9Q5G2 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Pcdhb9E9Q5G2 Gm13689-201ENSMUST00000119360 685 ntBASIC16.23■□□□□ 0.19
Pcdhb9E9Q5G2 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC16.23■□□□□ 0.19
Pcdhb9E9Q5G2 Gm27701-201ENSMUST00000184498 110 ntBASIC16.23■□□□□ 0.19
Pcdhb9E9Q5G2 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC16.23■□□□□ 0.19
Pcdhb9E9Q5G2 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC16.23■□□□□ 0.19
Pcdhb9E9Q5G2 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb9E9Q5G2 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb9E9Q5G2 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Pcdhb9E9Q5G2 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb9E9Q5G2 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb9E9Q5G2 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb9E9Q5G2 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb9E9Q5G2 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Pcdhb9E9Q5G2 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb9E9Q5G2 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC16.23■□□□□ 0.19
Pcdhb9E9Q5G2 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb9E9Q5G2 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb9E9Q5G2 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Pcdhb9E9Q5G2 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Pcdhb9E9Q5G2 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb9E9Q5G2 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb9E9Q5G2 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb9E9Q5G2 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb9E9Q5G2 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb9E9Q5G2 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
Pcdhb9E9Q5G2 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb9E9Q5G2 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb9E9Q5G2 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb9E9Q5G2 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb9E9Q5G2 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb9E9Q5G2 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb9E9Q5G2 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC16.22■□□□□ 0.19
Pcdhb9E9Q5G2 Gm5745-201ENSMUST00000183748 313 ntBASIC16.22■□□□□ 0.19
Pcdhb9E9Q5G2 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC16.22■□□□□ 0.19
Pcdhb9E9Q5G2 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC16.22■□□□□ 0.19
Pcdhb9E9Q5G2 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb9E9Q5G2 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb9E9Q5G2 AC155252.1-201ENSMUST00000226462 1208 ntBASIC16.22■□□□□ 0.19
Pcdhb9E9Q5G2 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
Pcdhb9E9Q5G2 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb9E9Q5G2 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb9E9Q5G2 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Pcdhb9E9Q5G2 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb9E9Q5G2 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb9E9Q5G2 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb9E9Q5G2 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb9E9Q5G2 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb9E9Q5G2 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
Pcdhb9E9Q5G2 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb9E9Q5G2 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
Pcdhb9E9Q5G2 Gm15163-201ENSMUST00000120749 1302 ntBASIC16.21■□□□□ 0.19
Pcdhb9E9Q5G2 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb9E9Q5G2 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb9E9Q5G2 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb9E9Q5G2 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb9E9Q5G2 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb9E9Q5G2 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb9E9Q5G2 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb9E9Q5G2 Gm28911-201ENSMUST00000188837 117 ntBASIC16.21■□□□□ 0.19
Pcdhb9E9Q5G2 Gm5069-202ENSMUST00000192714 1011 ntBASIC16.21■□□□□ 0.19
Pcdhb9E9Q5G2 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb9E9Q5G2 Gm45059-201ENSMUST00000205558 1077 ntBASIC16.21■□□□□ 0.19
Pcdhb9E9Q5G2 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb9E9Q5G2 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb9E9Q5G2 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb9E9Q5G2 Gm37912-201ENSMUST00000191895 3076 ntBASIC16.21■□□□□ 0.19
Pcdhb9E9Q5G2 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
Pcdhb9E9Q5G2 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Pcdhb9E9Q5G2 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
Pcdhb9E9Q5G2 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Pcdhb9E9Q5G2 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC16.2■□□□□ 0.18
Pcdhb9E9Q5G2 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb9E9Q5G2 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb9E9Q5G2 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb9E9Q5G2 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb9E9Q5G2 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb9E9Q5G2 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb9E9Q5G2 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Pcdhb9E9Q5G2 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb9E9Q5G2 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb9E9Q5G2 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Pcdhb9E9Q5G2 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Pcdhb9E9Q5G2 Gm15770-201ENSMUST00000117498 584 ntBASIC16.2■□□□□ 0.18
Pcdhb9E9Q5G2 Gm12416-201ENSMUST00000120911 1008 ntBASIC16.2■□□□□ 0.18
Pcdhb9E9Q5G2 Gm11918-201ENSMUST00000121660 179 ntBASIC16.2■□□□□ 0.18
Pcdhb9E9Q5G2 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb9E9Q5G2 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb9E9Q5G2 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb9E9Q5G2 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb9E9Q5G2 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb9E9Q5G2 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb9E9Q5G2 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb9E9Q5G2 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb9E9Q5G2 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC16.2■□□□□ 0.18
Pcdhb9E9Q5G2 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb9E9Q5G2 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Pcdhb9E9Q5G2 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms