Protein–RNA interactions for Protein: E9Q4T4

Ccdc71l, Coiled-coil domain-containing 71-like, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc71lE9Q4T4 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccdc71lE9Q4T4 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Ccdc71lE9Q4T4 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Ccdc71lE9Q4T4 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Ccdc71lE9Q4T4 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Ccdc71lE9Q4T4 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Ccdc71lE9Q4T4 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccdc71lE9Q4T4 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccdc71lE9Q4T4 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Ccdc71lE9Q4T4 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccdc71lE9Q4T4 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccdc71lE9Q4T4 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC10.89□□□□□ -0.67
Ccdc71lE9Q4T4 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccdc71lE9Q4T4 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccdc71lE9Q4T4 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccdc71lE9Q4T4 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccdc71lE9Q4T4 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccdc71lE9Q4T4 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccdc71lE9Q4T4 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Ccdc71lE9Q4T4 Gm5479-201ENSMUST00000160578 435 ntBASIC10.89□□□□□ -0.67
Ccdc71lE9Q4T4 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC10.89□□□□□ -0.67
Ccdc71lE9Q4T4 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC10.89□□□□□ -0.67
Ccdc71lE9Q4T4 Gm37230-201ENSMUST00000194491 818 ntBASIC10.89□□□□□ -0.67
Ccdc71lE9Q4T4 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC10.89□□□□□ -0.67
Ccdc71lE9Q4T4 AC084391.1-201ENSMUST00000200651 141 ntBASIC10.89□□□□□ -0.67
Ccdc71lE9Q4T4 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC10.89□□□□□ -0.67
Ccdc71lE9Q4T4 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Ccdc71lE9Q4T4 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccdc71lE9Q4T4 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccdc71lE9Q4T4 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccdc71lE9Q4T4 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccdc71lE9Q4T4 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccdc71lE9Q4T4 Mmp14-206ENSMUST00000225641 3238 ntBASIC10.89□□□□□ -0.67
Ccdc71lE9Q4T4 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccdc71lE9Q4T4 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccdc71lE9Q4T4 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccdc71lE9Q4T4 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC10.89□□□□□ -0.67
Ccdc71lE9Q4T4 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccdc71lE9Q4T4 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Ccdc71lE9Q4T4 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccdc71lE9Q4T4 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccdc71lE9Q4T4 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccdc71lE9Q4T4 Paupar-201ENSMUST00000194826 3482 ntBASIC10.89□□□□□ -0.67
Ccdc71lE9Q4T4 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccdc71lE9Q4T4 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccdc71lE9Q4T4 Gm5763-201ENSMUST00000155951 1530 ntBASIC10.89□□□□□ -0.67
Ccdc71lE9Q4T4 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Ccdc71lE9Q4T4 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Ccdc71lE9Q4T4 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccdc71lE9Q4T4 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Ccdc71lE9Q4T4 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccdc71lE9Q4T4 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccdc71lE9Q4T4 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccdc71lE9Q4T4 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccdc71lE9Q4T4 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Ccdc71lE9Q4T4 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccdc71lE9Q4T4 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Ccdc71lE9Q4T4 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccdc71lE9Q4T4 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Ccdc71lE9Q4T4 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccdc71lE9Q4T4 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Ccdc71lE9Q4T4 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccdc71lE9Q4T4 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC10.88□□□□□ -0.67
Ccdc71lE9Q4T4 Gm38102-201ENSMUST00000192791 1935 ntBASIC10.88□□□□□ -0.67
Ccdc71lE9Q4T4 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
Ccdc71lE9Q4T4 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Ccdc71lE9Q4T4 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccdc71lE9Q4T4 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccdc71lE9Q4T4 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccdc71lE9Q4T4 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccdc71lE9Q4T4 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Ccdc71lE9Q4T4 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC10.88□□□□□ -0.67
Ccdc71lE9Q4T4 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Ccdc71lE9Q4T4 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
Ccdc71lE9Q4T4 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccdc71lE9Q4T4 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Ccdc71lE9Q4T4 Mir5126-201ENSMUST00000175513 77 ntBASIC10.88□□□□□ -0.67
Ccdc71lE9Q4T4 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Ccdc71lE9Q4T4 Gm5864-201ENSMUST00000202263 970 ntBASIC10.88□□□□□ -0.67
Ccdc71lE9Q4T4 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC10.88□□□□□ -0.67
Ccdc71lE9Q4T4 Gm18244-201ENSMUST00000219747 1566 ntBASIC10.88□□□□□ -0.67
Ccdc71lE9Q4T4 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Ccdc71lE9Q4T4 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccdc71lE9Q4T4 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Ccdc71lE9Q4T4 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccdc71lE9Q4T4 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC10.88□□□□□ -0.67
Ccdc71lE9Q4T4 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Ccdc71lE9Q4T4 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccdc71lE9Q4T4 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccdc71lE9Q4T4 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Ccdc71lE9Q4T4 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC10.88□□□□□ -0.67
Ccdc71lE9Q4T4 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC10.88□□□□□ -0.67
Ccdc71lE9Q4T4 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccdc71lE9Q4T4 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Ccdc71lE9Q4T4 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Ccdc71lE9Q4T4 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Ccdc71lE9Q4T4 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccdc71lE9Q4T4 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Ccdc71lE9Q4T4 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC10.88□□□□□ -0.67
Ccdc71lE9Q4T4 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms