Protein–RNA interactions for Protein: A8DUK4

Hbb-bs, Beta-globin, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-bsA8DUK4 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Hbb-bsA8DUK4 Gm5763-201ENSMUST00000155951 1530 ntBASIC9.72□□□□□ -0.85
Hbb-bsA8DUK4 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
Hbb-bsA8DUK4 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Hbb-bsA8DUK4 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.85
Hbb-bsA8DUK4 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Hbb-bsA8DUK4 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.85
Hbb-bsA8DUK4 Gm19817-201ENSMUST00000199764 2132 ntBASIC9.71□□□□□ -0.85
Hbb-bsA8DUK4 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Hbb-bsA8DUK4 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
Hbb-bsA8DUK4 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Hbb-bsA8DUK4 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC9.71□□□□□ -0.85
Hbb-bsA8DUK4 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Hbb-bsA8DUK4 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC9.71□□□□□ -0.85
Hbb-bsA8DUK4 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Hbb-bsA8DUK4 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Hbb-bsA8DUK4 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.85
Hbb-bsA8DUK4 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Hbb-bsA8DUK4 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Hbb-bsA8DUK4 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Hbb-bsA8DUK4 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.86
Hbb-bsA8DUK4 Gm13168-201ENSMUST00000121771 632 ntBASIC9.71□□□□□ -0.86
Hbb-bsA8DUK4 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Hbb-bsA8DUK4 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC9.71□□□□□ -0.86
Hbb-bsA8DUK4 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC9.71□□□□□ -0.86
Hbb-bsA8DUK4 Gm6944-201ENSMUST00000182449 1006 ntBASIC9.71□□□□□ -0.86
Hbb-bsA8DUK4 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC9.71□□□□□ -0.86
Hbb-bsA8DUK4 Arhgef33-211ENSMUST00000225658 473 ntBASIC9.71□□□□□ -0.86
Hbb-bsA8DUK4 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Hbb-bsA8DUK4 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Hbb-bsA8DUK4 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC9.71□□□□□ -0.86
Hbb-bsA8DUK4 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Hbb-bsA8DUK4 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC9.71□□□□□ -0.86
Hbb-bsA8DUK4 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Hbb-bsA8DUK4 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Hbb-bsA8DUK4 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Hbb-bsA8DUK4 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC9.71□□□□□ -0.86
Hbb-bsA8DUK4 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Hbb-bsA8DUK4 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Hbb-bsA8DUK4 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Hbb-bsA8DUK4 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC9.71□□□□□ -0.86
Hbb-bsA8DUK4 Gm45643-201ENSMUST00000211364 1484 ntBASIC9.71□□□□□ -0.86
Hbb-bsA8DUK4 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
Hbb-bsA8DUK4 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Hbb-bsA8DUK4 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Hbb-bsA8DUK4 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Hbb-bsA8DUK4 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Hbb-bsA8DUK4 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Hbb-bsA8DUK4 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Hbb-bsA8DUK4 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC9.71□□□□□ -0.86
Hbb-bsA8DUK4 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Hbb-bsA8DUK4 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC9.71□□□□□ -0.86
Hbb-bsA8DUK4 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Hbb-bsA8DUK4 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Hbb-bsA8DUK4 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC9.71□□□□□ -0.86
Hbb-bsA8DUK4 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
Hbb-bsA8DUK4 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Hbb-bsA8DUK4 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Hbb-bsA8DUK4 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC9.7□□□□□ -0.86
Hbb-bsA8DUK4 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Hbb-bsA8DUK4 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Hbb-bsA8DUK4 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Hbb-bsA8DUK4 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC9.7□□□□□ -0.86
Hbb-bsA8DUK4 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Hbb-bsA8DUK4 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Hbb-bsA8DUK4 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Hbb-bsA8DUK4 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Hbb-bsA8DUK4 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC9.7□□□□□ -0.86
Hbb-bsA8DUK4 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Hbb-bsA8DUK4 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Hbb-bsA8DUK4 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Hbb-bsA8DUK4 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Hbb-bsA8DUK4 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Hbb-bsA8DUK4 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Hbb-bsA8DUK4 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Hbb-bsA8DUK4 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Hbb-bsA8DUK4 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC9.7□□□□□ -0.86
Hbb-bsA8DUK4 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC9.7□□□□□ -0.86
Hbb-bsA8DUK4 Gm12497-201ENSMUST00000138778 237 ntBASIC9.7□□□□□ -0.86
Hbb-bsA8DUK4 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC9.7□□□□□ -0.86
Hbb-bsA8DUK4 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC9.7□□□□□ -0.86
Hbb-bsA8DUK4 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Hbb-bsA8DUK4 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC9.7□□□□□ -0.86
Hbb-bsA8DUK4 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Hbb-bsA8DUK4 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC9.7□□□□□ -0.86
Hbb-bsA8DUK4 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC9.7□□□□□ -0.86
Hbb-bsA8DUK4 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Hbb-bsA8DUK4 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Hbb-bsA8DUK4 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC9.7□□□□□ -0.86
Hbb-bsA8DUK4 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Hbb-bsA8DUK4 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Hbb-bsA8DUK4 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Hbb-bsA8DUK4 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Hbb-bsA8DUK4 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Hbb-bsA8DUK4 Gm13722-201ENSMUST00000117964 3066 ntBASIC9.7□□□□□ -0.86
Hbb-bsA8DUK4 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Hbb-bsA8DUK4 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Hbb-bsA8DUK4 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Hbb-bsA8DUK4 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Hbb-bsA8DUK4 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms