Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Scn1aA2APX8 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn1aA2APX8 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Scn1aA2APX8 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Scn1aA2APX8 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Scn1aA2APX8 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC14.4□□□□□ -0.1
Scn1aA2APX8 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC14.4□□□□□ -0.1
Scn1aA2APX8 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Scn1aA2APX8 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn1aA2APX8 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn1aA2APX8 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Scn1aA2APX8 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Scn1aA2APX8 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.4□□□□□ -0.1
Scn1aA2APX8 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Scn1aA2APX8 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Scn1aA2APX8 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC14.4□□□□□ -0.1
Scn1aA2APX8 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Scn1aA2APX8 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn1aA2APX8 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn1aA2APX8 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn1aA2APX8 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC14.4□□□□□ -0.1
Scn1aA2APX8 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC14.4□□□□□ -0.1
Scn1aA2APX8 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Scn1aA2APX8 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.4□□□□□ -0.11
Scn1aA2APX8 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.11
Scn1aA2APX8 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn1aA2APX8 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn1aA2APX8 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
Scn1aA2APX8 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn1aA2APX8 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn1aA2APX8 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn1aA2APX8 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn1aA2APX8 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn1aA2APX8 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn1aA2APX8 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC14.39□□□□□ -0.11
Scn1aA2APX8 Gm38223-201ENSMUST00000194484 695 ntBASIC14.39□□□□□ -0.11
Scn1aA2APX8 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Scn1aA2APX8 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn1aA2APX8 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn1aA2APX8 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn1aA2APX8 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn1aA2APX8 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn1aA2APX8 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Scn1aA2APX8 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Scn1aA2APX8 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Scn1aA2APX8 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Scn1aA2APX8 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn1aA2APX8 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Scn1aA2APX8 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn1aA2APX8 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Scn1aA2APX8 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.39□□□□□ -0.11
Scn1aA2APX8 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC14.39□□□□□ -0.11
Scn1aA2APX8 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Scn1aA2APX8 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Scn1aA2APX8 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Scn1aA2APX8 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn1aA2APX8 Gm18187-201ENSMUST00000196476 984 ntBASIC14.39□□□□□ -0.11
Scn1aA2APX8 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC14.39□□□□□ -0.11
Scn1aA2APX8 Gm18473-201ENSMUST00000220543 868 ntBASIC14.39□□□□□ -0.11
Scn1aA2APX8 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Scn1aA2APX8 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn1aA2APX8 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn1aA2APX8 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn1aA2APX8 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn1aA2APX8 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Scn1aA2APX8 Gm7899-201ENSMUST00000192935 1897 ntBASIC14.38□□□□□ -0.11
Scn1aA2APX8 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn1aA2APX8 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Scn1aA2APX8 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Scn1aA2APX8 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Scn1aA2APX8 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn1aA2APX8 Gm12390-201ENSMUST00000117897 397 ntBASIC14.38□□□□□ -0.11
Scn1aA2APX8 Gm8602-201ENSMUST00000184045 607 ntBASIC14.38□□□□□ -0.11
Scn1aA2APX8 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Scn1aA2APX8 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Scn1aA2APX8 Cdk7-205ENSMUST00000225990 1159 ntBASIC14.38□□□□□ -0.11
Scn1aA2APX8 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn1aA2APX8 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn1aA2APX8 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn1aA2APX8 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn1aA2APX8 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.38□□□□□ -0.11
Scn1aA2APX8 Gm5639-201ENSMUST00000122305 2403 ntBASIC14.38□□□□□ -0.11
Scn1aA2APX8 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Scn1aA2APX8 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn1aA2APX8 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn1aA2APX8 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Scn1aA2APX8 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Scn1aA2APX8 Gm17150-201ENSMUST00000165577 381 ntBASIC14.37□□□□□ -0.11
Scn1aA2APX8 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Scn1aA2APX8 Gm7287-201ENSMUST00000205267 602 ntBASIC14.37□□□□□ -0.11
Scn1aA2APX8 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn1aA2APX8 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn1aA2APX8 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn1aA2APX8 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC14.37□□□□□ -0.11
Scn1aA2APX8 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn1aA2APX8 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Scn1aA2APX8 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn1aA2APX8 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Scn1aA2APX8 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn1aA2APX8 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms