Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav6n-6A0A075B6B2 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav6n-6A0A075B6B2 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav6n-6A0A075B6B2 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav6n-6A0A075B6B2 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Trav6n-6A0A075B6B2 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC10.34□□□□□ -0.75
Trav6n-6A0A075B6B2 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav6n-6A0A075B6B2 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav6n-6A0A075B6B2 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav6n-6A0A075B6B2 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Trav6n-6A0A075B6B2 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav6n-6A0A075B6B2 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav6n-6A0A075B6B2 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav6n-6A0A075B6B2 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC10.34□□□□□ -0.75
Trav6n-6A0A075B6B2 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav6n-6A0A075B6B2 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav6n-6A0A075B6B2 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav6n-6A0A075B6B2 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav6n-6A0A075B6B2 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav6n-6A0A075B6B2 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav6n-6A0A075B6B2 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav6n-6A0A075B6B2 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav6n-6A0A075B6B2 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav6n-6A0A075B6B2 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Trav6n-6A0A075B6B2 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
Trav6n-6A0A075B6B2 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC10.34□□□□□ -0.75
Trav6n-6A0A075B6B2 Gm2756-201ENSMUST00000195851 400 ntBASIC10.34□□□□□ -0.75
Trav6n-6A0A075B6B2 Gm43073-201ENSMUST00000198200 1189 ntBASIC10.34□□□□□ -0.75
Trav6n-6A0A075B6B2 Gm43332-201ENSMUST00000202511 1044 ntBASIC10.34□□□□□ -0.75
Trav6n-6A0A075B6B2 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC10.34□□□□□ -0.75
Trav6n-6A0A075B6B2 Gm44945-201ENSMUST00000206764 1187 ntBASIC10.34□□□□□ -0.75
Trav6n-6A0A075B6B2 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Trav6n-6A0A075B6B2 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav6n-6A0A075B6B2 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
Trav6n-6A0A075B6B2 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav6n-6A0A075B6B2 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC10.34□□□□□ -0.75
Trav6n-6A0A075B6B2 Gm42706-201ENSMUST00000199733 1910 ntBASIC10.34□□□□□ -0.75
Trav6n-6A0A075B6B2 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav6n-6A0A075B6B2 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav6n-6A0A075B6B2 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav6n-6A0A075B6B2 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav6n-6A0A075B6B2 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav6n-6A0A075B6B2 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC10.34□□□□□ -0.75
Trav6n-6A0A075B6B2 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav6n-6A0A075B6B2 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav6n-6A0A075B6B2 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav6n-6A0A075B6B2 Gm7899-201ENSMUST00000192935 1897 ntBASIC10.34□□□□□ -0.75
Trav6n-6A0A075B6B2 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC10.34□□□□□ -0.75
Trav6n-6A0A075B6B2 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Trav6n-6A0A075B6B2 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav6n-6A0A075B6B2 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav6n-6A0A075B6B2 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Trav6n-6A0A075B6B2 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Trav6n-6A0A075B6B2 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav6n-6A0A075B6B2 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Trav6n-6A0A075B6B2 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav6n-6A0A075B6B2 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav6n-6A0A075B6B2 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav6n-6A0A075B6B2 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav6n-6A0A075B6B2 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav6n-6A0A075B6B2 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC10.33□□□□□ -0.76
Trav6n-6A0A075B6B2 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav6n-6A0A075B6B2 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav6n-6A0A075B6B2 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav6n-6A0A075B6B2 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC10.33□□□□□ -0.76
Trav6n-6A0A075B6B2 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav6n-6A0A075B6B2 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Trav6n-6A0A075B6B2 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav6n-6A0A075B6B2 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Trav6n-6A0A075B6B2 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav6n-6A0A075B6B2 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav6n-6A0A075B6B2 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Trav6n-6A0A075B6B2 Gm44492-201ENSMUST00000197012 141 ntBASIC10.33□□□□□ -0.76
Trav6n-6A0A075B6B2 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC10.33□□□□□ -0.76
Trav6n-6A0A075B6B2 Bloc1s5-203ENSMUST00000224902 612 ntBASIC10.33□□□□□ -0.76
Trav6n-6A0A075B6B2 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav6n-6A0A075B6B2 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav6n-6A0A075B6B2 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Trav6n-6A0A075B6B2 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav6n-6A0A075B6B2 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav6n-6A0A075B6B2 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav6n-6A0A075B6B2 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav6n-6A0A075B6B2 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC10.33□□□□□ -0.76
Trav6n-6A0A075B6B2 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC10.33□□□□□ -0.76
Trav6n-6A0A075B6B2 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav6n-6A0A075B6B2 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Trav6n-6A0A075B6B2 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav6n-6A0A075B6B2 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav6n-6A0A075B6B2 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav6n-6A0A075B6B2 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav6n-6A0A075B6B2 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav6n-6A0A075B6B2 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav6n-6A0A075B6B2 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav6n-6A0A075B6B2 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC10.33□□□□□ -0.76
Trav6n-6A0A075B6B2 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav6n-6A0A075B6B2 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav6n-6A0A075B6B2 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav6n-6A0A075B6B2 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC10.33□□□□□ -0.76
Trav6n-6A0A075B6B2 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav6n-6A0A075B6B2 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC10.32□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 74.4 ms