Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Smarcb1Q9Z0H3 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Smarcb1Q9Z0H3 Gm5912-201ENSMUST00000122282 1438 ntBASIC14.33□□□□□ -0.11
Smarcb1Q9Z0H3 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Smarcb1Q9Z0H3 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Smarcb1Q9Z0H3 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Smarcb1Q9Z0H3 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smarcb1Q9Z0H3 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Smarcb1Q9Z0H3 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smarcb1Q9Z0H3 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smarcb1Q9Z0H3 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Smarcb1Q9Z0H3 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smarcb1Q9Z0H3 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smarcb1Q9Z0H3 Gm4984-201ENSMUST00000115987 360 ntBASIC14.33□□□□□ -0.12
Smarcb1Q9Z0H3 Gm13689-201ENSMUST00000119360 685 ntBASIC14.33□□□□□ -0.12
Smarcb1Q9Z0H3 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC14.33□□□□□ -0.12
Smarcb1Q9Z0H3 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC14.33□□□□□ -0.12
Smarcb1Q9Z0H3 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Smarcb1Q9Z0H3 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC14.33□□□□□ -0.12
Smarcb1Q9Z0H3 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smarcb1Q9Z0H3 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Smarcb1Q9Z0H3 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Smarcb1Q9Z0H3 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Smarcb1Q9Z0H3 Gm38144-201ENSMUST00000192790 465 ntBASIC14.33□□□□□ -0.12
Smarcb1Q9Z0H3 Gm44799-201ENSMUST00000207639 1202 ntBASIC14.33□□□□□ -0.12
Smarcb1Q9Z0H3 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Smarcb1Q9Z0H3 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smarcb1Q9Z0H3 Cdk7-205ENSMUST00000225990 1159 ntBASIC14.33□□□□□ -0.12
Smarcb1Q9Z0H3 Gm25857-201ENSMUST00000082788 129 ntBASIC14.33□□□□□ -0.12
Smarcb1Q9Z0H3 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smarcb1Q9Z0H3 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Smarcb1Q9Z0H3 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smarcb1Q9Z0H3 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smarcb1Q9Z0H3 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Smarcb1Q9Z0H3 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smarcb1Q9Z0H3 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Smarcb1Q9Z0H3 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC14.33□□□□□ -0.12
Smarcb1Q9Z0H3 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC14.33□□□□□ -0.12
Smarcb1Q9Z0H3 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Smarcb1Q9Z0H3 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Smarcb1Q9Z0H3 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.33□□□□□ -0.12
Smarcb1Q9Z0H3 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smarcb1Q9Z0H3 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smarcb1Q9Z0H3 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Smarcb1Q9Z0H3 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Smarcb1Q9Z0H3 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smarcb1Q9Z0H3 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Smarcb1Q9Z0H3 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smarcb1Q9Z0H3 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smarcb1Q9Z0H3 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.33□□□□□ -0.12
Smarcb1Q9Z0H3 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcb1Q9Z0H3 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC14.32□□□□□ -0.12
Smarcb1Q9Z0H3 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC14.32□□□□□ -0.12
Smarcb1Q9Z0H3 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.32□□□□□ -0.12
Smarcb1Q9Z0H3 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcb1Q9Z0H3 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcb1Q9Z0H3 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcb1Q9Z0H3 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcb1Q9Z0H3 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcb1Q9Z0H3 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcb1Q9Z0H3 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC14.32□□□□□ -0.12
Smarcb1Q9Z0H3 Gm6266-201ENSMUST00000203844 806 ntBASIC14.32□□□□□ -0.12
Smarcb1Q9Z0H3 Gm18062-201ENSMUST00000208020 547 ntBASIC14.32□□□□□ -0.12
Smarcb1Q9Z0H3 Gm18055-201ENSMUST00000208254 547 ntBASIC14.32□□□□□ -0.12
Smarcb1Q9Z0H3 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcb1Q9Z0H3 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.32□□□□□ -0.12
Smarcb1Q9Z0H3 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Smarcb1Q9Z0H3 Gm8337-201ENSMUST00000187358 1938 ntBASIC14.32□□□□□ -0.12
Smarcb1Q9Z0H3 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcb1Q9Z0H3 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcb1Q9Z0H3 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcb1Q9Z0H3 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcb1Q9Z0H3 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcb1Q9Z0H3 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcb1Q9Z0H3 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcb1Q9Z0H3 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcb1Q9Z0H3 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcb1Q9Z0H3 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcb1Q9Z0H3 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcb1Q9Z0H3 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcb1Q9Z0H3 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC14.31□□□□□ -0.12
Smarcb1Q9Z0H3 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcb1Q9Z0H3 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcb1Q9Z0H3 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcb1Q9Z0H3 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcb1Q9Z0H3 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcb1Q9Z0H3 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcb1Q9Z0H3 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcb1Q9Z0H3 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC14.31□□□□□ -0.12
Smarcb1Q9Z0H3 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC14.31□□□□□ -0.12
Smarcb1Q9Z0H3 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcb1Q9Z0H3 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcb1Q9Z0H3 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcb1Q9Z0H3 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcb1Q9Z0H3 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcb1Q9Z0H3 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC14.31□□□□□ -0.12
Smarcb1Q9Z0H3 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Smarcb1Q9Z0H3 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC14.31□□□□□ -0.12
Smarcb1Q9Z0H3 Gm5276-201ENSMUST00000196683 1047 ntBASIC14.31□□□□□ -0.12
Smarcb1Q9Z0H3 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms