Protein–RNA interactions for Protein: Q9JM99

Prg4, Proteoglycan 4, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prg4Q9JM99 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Prg4Q9JM99 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Prg4Q9JM99 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Prg4Q9JM99 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Prg4Q9JM99 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Prg4Q9JM99 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Prg4Q9JM99 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Prg4Q9JM99 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Prg4Q9JM99 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Prg4Q9JM99 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Prg4Q9JM99 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC12.59□□□□□ -0.39
Prg4Q9JM99 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Prg4Q9JM99 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Prg4Q9JM99 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC12.59□□□□□ -0.39
Prg4Q9JM99 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Prg4Q9JM99 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Prg4Q9JM99 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Prg4Q9JM99 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Prg4Q9JM99 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC12.59□□□□□ -0.39
Prg4Q9JM99 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.59□□□□□ -0.39
Prg4Q9JM99 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Prg4Q9JM99 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.59□□□□□ -0.39
Prg4Q9JM99 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC12.59□□□□□ -0.39
Prg4Q9JM99 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Prg4Q9JM99 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC12.59□□□□□ -0.39
Prg4Q9JM99 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Prg4Q9JM99 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Prg4Q9JM99 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.59□□□□□ -0.39
Prg4Q9JM99 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Prg4Q9JM99 Gm45925-201ENSMUST00000218882 744 ntBASIC12.59□□□□□ -0.39
Prg4Q9JM99 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Prg4Q9JM99 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Prg4Q9JM99 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Prg4Q9JM99 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Prg4Q9JM99 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Prg4Q9JM99 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Prg4Q9JM99 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Prg4Q9JM99 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Prg4Q9JM99 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Prg4Q9JM99 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Prg4Q9JM99 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Prg4Q9JM99 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Prg4Q9JM99 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Prg4Q9JM99 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Prg4Q9JM99 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Prg4Q9JM99 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Prg4Q9JM99 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Prg4Q9JM99 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Prg4Q9JM99 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Prg4Q9JM99 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Prg4Q9JM99 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Prg4Q9JM99 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Prg4Q9JM99 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Prg4Q9JM99 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Prg4Q9JM99 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
Prg4Q9JM99 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Prg4Q9JM99 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Prg4Q9JM99 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Prg4Q9JM99 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Prg4Q9JM99 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Prg4Q9JM99 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Prg4Q9JM99 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Prg4Q9JM99 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Prg4Q9JM99 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Prg4Q9JM99 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Prg4Q9JM99 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.58□□□□□ -0.4
Prg4Q9JM99 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Prg4Q9JM99 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Prg4Q9JM99 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Prg4Q9JM99 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Prg4Q9JM99 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Prg4Q9JM99 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Prg4Q9JM99 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Prg4Q9JM99 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Prg4Q9JM99 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Prg4Q9JM99 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Prg4Q9JM99 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.58□□□□□ -0.4
Prg4Q9JM99 Gm28911-201ENSMUST00000188837 117 ntBASIC12.58□□□□□ -0.4
Prg4Q9JM99 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.58□□□□□ -0.4
Prg4Q9JM99 Gm38223-201ENSMUST00000194484 695 ntBASIC12.58□□□□□ -0.4
Prg4Q9JM99 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.58□□□□□ -0.4
Prg4Q9JM99 Gm45384-201ENSMUST00000210451 277 ntBASIC12.58□□□□□ -0.4
Prg4Q9JM99 Gm9908-201ENSMUST00000211534 448 ntBASIC12.58□□□□□ -0.4
Prg4Q9JM99 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Prg4Q9JM99 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Prg4Q9JM99 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Prg4Q9JM99 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Prg4Q9JM99 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Prg4Q9JM99 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Prg4Q9JM99 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Prg4Q9JM99 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Prg4Q9JM99 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
Prg4Q9JM99 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Prg4Q9JM99 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Prg4Q9JM99 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Prg4Q9JM99 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Prg4Q9JM99 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Prg4Q9JM99 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Prg4Q9JM99 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Prg4Q9JM99 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms