Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ube4bQ9ES00 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC13.3□□□□□ -0.28
Ube4bQ9ES00 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.3□□□□□ -0.28
Ube4bQ9ES00 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ube4bQ9ES00 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ube4bQ9ES00 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ube4bQ9ES00 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.3□□□□□ -0.28
Ube4bQ9ES00 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Ube4bQ9ES00 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ube4bQ9ES00 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ube4bQ9ES00 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ube4bQ9ES00 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ube4bQ9ES00 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ube4bQ9ES00 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ube4bQ9ES00 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC13.3□□□□□ -0.28
Ube4bQ9ES00 Gm11764-201ENSMUST00000120221 623 ntBASIC13.3□□□□□ -0.28
Ube4bQ9ES00 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ube4bQ9ES00 Gm5253-201ENSMUST00000187104 1025 ntBASIC13.3□□□□□ -0.28
Ube4bQ9ES00 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC13.3□□□□□ -0.28
Ube4bQ9ES00 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC13.3□□□□□ -0.28
Ube4bQ9ES00 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ube4bQ9ES00 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ube4bQ9ES00 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ube4bQ9ES00 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ube4bQ9ES00 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Ube4bQ9ES00 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ube4bQ9ES00 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ube4bQ9ES00 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ube4bQ9ES00 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ube4bQ9ES00 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ube4bQ9ES00 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ube4bQ9ES00 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ube4bQ9ES00 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ube4bQ9ES00 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ube4bQ9ES00 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ube4bQ9ES00 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ube4bQ9ES00 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ube4bQ9ES00 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ube4bQ9ES00 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ube4bQ9ES00 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ube4bQ9ES00 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ube4bQ9ES00 Gm9279-201ENSMUST00000223175 1606 ntBASIC13.29□□□□□ -0.28
Ube4bQ9ES00 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Ube4bQ9ES00 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ube4bQ9ES00 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ube4bQ9ES00 Gm7862-201ENSMUST00000121461 292 ntBASIC13.29□□□□□ -0.28
Ube4bQ9ES00 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ube4bQ9ES00 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ube4bQ9ES00 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC13.29□□□□□ -0.28
Ube4bQ9ES00 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
Ube4bQ9ES00 Gm9682-201ENSMUST00000197505 556 ntBASIC13.29□□□□□ -0.28
Ube4bQ9ES00 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC13.29□□□□□ -0.28
Ube4bQ9ES00 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ube4bQ9ES00 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC13.29□□□□□ -0.28
Ube4bQ9ES00 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ube4bQ9ES00 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ube4bQ9ES00 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC13.29□□□□□ -0.28
Ube4bQ9ES00 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ube4bQ9ES00 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ube4bQ9ES00 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ube4bQ9ES00 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ube4bQ9ES00 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.29□□□□□ -0.28
Ube4bQ9ES00 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ube4bQ9ES00 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Ube4bQ9ES00 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ube4bQ9ES00 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ube4bQ9ES00 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ube4bQ9ES00 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Ube4bQ9ES00 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ube4bQ9ES00 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC13.29□□□□□ -0.28
Ube4bQ9ES00 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ube4bQ9ES00 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ube4bQ9ES00 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ube4bQ9ES00 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Ube4bQ9ES00 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Ube4bQ9ES00 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC13.28□□□□□ -0.28
Ube4bQ9ES00 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ube4bQ9ES00 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Ube4bQ9ES00 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ube4bQ9ES00 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ube4bQ9ES00 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ube4bQ9ES00 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ube4bQ9ES00 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Ube4bQ9ES00 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.28□□□□□ -0.28
Ube4bQ9ES00 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ube4bQ9ES00 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ube4bQ9ES00 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ube4bQ9ES00 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ube4bQ9ES00 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ube4bQ9ES00 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC13.28□□□□□ -0.28
Ube4bQ9ES00 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Ube4bQ9ES00 Gm5682-201ENSMUST00000173402 505 ntBASIC13.28□□□□□ -0.28
Ube4bQ9ES00 Gm5712-201ENSMUST00000199748 1043 ntBASIC13.28□□□□□ -0.28
Ube4bQ9ES00 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.28□□□□□ -0.28
Ube4bQ9ES00 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ube4bQ9ES00 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ube4bQ9ES00 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ube4bQ9ES00 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ube4bQ9ES00 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ube4bQ9ES00 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms