Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Nkx2-4Q9EQM3 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC14.14□□□□□ -0.15
Nkx2-4Q9EQM3 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx2-4Q9EQM3 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Nkx2-4Q9EQM3 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx2-4Q9EQM3 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx2-4Q9EQM3 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.13□□□□□ -0.15
Nkx2-4Q9EQM3 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx2-4Q9EQM3 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx2-4Q9EQM3 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.13□□□□□ -0.15
Nkx2-4Q9EQM3 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Nkx2-4Q9EQM3 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx2-4Q9EQM3 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx2-4Q9EQM3 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx2-4Q9EQM3 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx2-4Q9EQM3 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx2-4Q9EQM3 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx2-4Q9EQM3 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC14.13□□□□□ -0.15
Nkx2-4Q9EQM3 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC14.13□□□□□ -0.15
Nkx2-4Q9EQM3 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx2-4Q9EQM3 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC14.13□□□□□ -0.15
Nkx2-4Q9EQM3 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx2-4Q9EQM3 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx2-4Q9EQM3 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx2-4Q9EQM3 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC14.13□□□□□ -0.15
Nkx2-4Q9EQM3 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Nkx2-4Q9EQM3 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx2-4Q9EQM3 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx2-4Q9EQM3 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx2-4Q9EQM3 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Nkx2-4Q9EQM3 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Nkx2-4Q9EQM3 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx2-4Q9EQM3 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx2-4Q9EQM3 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx2-4Q9EQM3 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx2-4Q9EQM3 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx2-4Q9EQM3 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx2-4Q9EQM3 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx2-4Q9EQM3 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC14.13□□□□□ -0.15
Nkx2-4Q9EQM3 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx2-4Q9EQM3 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx2-4Q9EQM3 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx2-4Q9EQM3 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx2-4Q9EQM3 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx2-4Q9EQM3 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx2-4Q9EQM3 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Nkx2-4Q9EQM3 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx2-4Q9EQM3 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx2-4Q9EQM3 Gm4986-201ENSMUST00000119731 549 ntBASIC14.12□□□□□ -0.15
Nkx2-4Q9EQM3 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC14.12□□□□□ -0.15
Nkx2-4Q9EQM3 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC14.12□□□□□ -0.15
Nkx2-4Q9EQM3 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC14.12□□□□□ -0.15
Nkx2-4Q9EQM3 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC14.12□□□□□ -0.15
Nkx2-4Q9EQM3 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx2-4Q9EQM3 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx2-4Q9EQM3 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx2-4Q9EQM3 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx2-4Q9EQM3 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx2-4Q9EQM3 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Nkx2-4Q9EQM3 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx2-4Q9EQM3 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx2-4Q9EQM3 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx2-4Q9EQM3 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx2-4Q9EQM3 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-4Q9EQM3 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-4Q9EQM3 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-4Q9EQM3 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-4Q9EQM3 Gm9755-201ENSMUST00000032981 1356 ntBASIC14.11□□□□□ -0.15
Nkx2-4Q9EQM3 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-4Q9EQM3 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Nkx2-4Q9EQM3 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-4Q9EQM3 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-4Q9EQM3 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-4Q9EQM3 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-4Q9EQM3 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-4Q9EQM3 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-4Q9EQM3 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC14.11□□□□□ -0.15
Nkx2-4Q9EQM3 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-4Q9EQM3 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-4Q9EQM3 Gm3809-201ENSMUST00000180973 1006 ntBASIC14.11□□□□□ -0.15
Nkx2-4Q9EQM3 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-4Q9EQM3 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC14.11□□□□□ -0.15
Nkx2-4Q9EQM3 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC14.11□□□□□ -0.15
Nkx2-4Q9EQM3 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Nkx2-4Q9EQM3 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-4Q9EQM3 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Nkx2-4Q9EQM3 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-4Q9EQM3 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-4Q9EQM3 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-4Q9EQM3 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-4Q9EQM3 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-4Q9EQM3 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-4Q9EQM3 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-4Q9EQM3 Gm43579-201ENSMUST00000202387 1307 ntBASIC14.11□□□□□ -0.15
Nkx2-4Q9EQM3 Gm9333-201ENSMUST00000205452 1323 ntBASIC14.11□□□□□ -0.15
Nkx2-4Q9EQM3 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-4Q9EQM3 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-4Q9EQM3 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-4Q9EQM3 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.11□□□□□ -0.15
Nkx2-4Q9EQM3 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms