Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp4cQ9D7F7 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
Chmp4cQ9D7F7 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Chmp4cQ9D7F7 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Chmp4cQ9D7F7 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Chmp4cQ9D7F7 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC16.58■□□□□ 0.25
Chmp4cQ9D7F7 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Chmp4cQ9D7F7 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chmp4cQ9D7F7 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Chmp4cQ9D7F7 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Chmp4cQ9D7F7 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC16.58■□□□□ 0.24
Chmp4cQ9D7F7 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Chmp4cQ9D7F7 Gm6222-201ENSMUST00000120787 396 ntBASIC16.58■□□□□ 0.24
Chmp4cQ9D7F7 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Chmp4cQ9D7F7 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC16.58■□□□□ 0.24
Chmp4cQ9D7F7 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chmp4cQ9D7F7 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC16.58■□□□□ 0.24
Chmp4cQ9D7F7 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC16.58■□□□□ 0.24
Chmp4cQ9D7F7 Gm27397-201ENSMUST00000184997 107 ntBASIC16.58■□□□□ 0.24
Chmp4cQ9D7F7 Gm29541-201ENSMUST00000191351 678 ntBASIC16.58■□□□□ 0.24
Chmp4cQ9D7F7 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Chmp4cQ9D7F7 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
Chmp4cQ9D7F7 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC16.58■□□□□ 0.24
Chmp4cQ9D7F7 Ndufaf2-202ENSMUST00000223734 556 ntBASIC16.58■□□□□ 0.24
Chmp4cQ9D7F7 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chmp4cQ9D7F7 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Chmp4cQ9D7F7 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Chmp4cQ9D7F7 Gm15889-202ENSMUST00000212669 2443 ntBASIC16.58■□□□□ 0.24
Chmp4cQ9D7F7 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Chmp4cQ9D7F7 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chmp4cQ9D7F7 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chmp4cQ9D7F7 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC16.58■□□□□ 0.24
Chmp4cQ9D7F7 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Chmp4cQ9D7F7 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp4cQ9D7F7 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Chmp4cQ9D7F7 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp4cQ9D7F7 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp4cQ9D7F7 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp4cQ9D7F7 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp4cQ9D7F7 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp4cQ9D7F7 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp4cQ9D7F7 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Chmp4cQ9D7F7 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Chmp4cQ9D7F7 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp4cQ9D7F7 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC16.57■□□□□ 0.24
Chmp4cQ9D7F7 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp4cQ9D7F7 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC16.57■□□□□ 0.24
Chmp4cQ9D7F7 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC16.57■□□□□ 0.24
Chmp4cQ9D7F7 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp4cQ9D7F7 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC16.57■□□□□ 0.24
Chmp4cQ9D7F7 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp4cQ9D7F7 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp4cQ9D7F7 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp4cQ9D7F7 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp4cQ9D7F7 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp4cQ9D7F7 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp4cQ9D7F7 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp4cQ9D7F7 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp4cQ9D7F7 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp4cQ9D7F7 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp4cQ9D7F7 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp4cQ9D7F7 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp4cQ9D7F7 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp4cQ9D7F7 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp4cQ9D7F7 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC16.56■□□□□ 0.24
Chmp4cQ9D7F7 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC16.56■□□□□ 0.24
Chmp4cQ9D7F7 Gm27631-201ENSMUST00000184163 466 ntBASIC16.56■□□□□ 0.24
Chmp4cQ9D7F7 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC16.56■□□□□ 0.24
Chmp4cQ9D7F7 Gm18766-201ENSMUST00000189811 808 ntBASIC16.56■□□□□ 0.24
Chmp4cQ9D7F7 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp4cQ9D7F7 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC16.56■□□□□ 0.24
Chmp4cQ9D7F7 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
Chmp4cQ9D7F7 Gm42872-201ENSMUST00000200026 1967 ntBASIC16.56■□□□□ 0.24
Chmp4cQ9D7F7 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Chmp4cQ9D7F7 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp4cQ9D7F7 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp4cQ9D7F7 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp4cQ9D7F7 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp4cQ9D7F7 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp4cQ9D7F7 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
Chmp4cQ9D7F7 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp4cQ9D7F7 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp4cQ9D7F7 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp4cQ9D7F7 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp4cQ9D7F7 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp4cQ9D7F7 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
Chmp4cQ9D7F7 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Chmp4cQ9D7F7 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp4cQ9D7F7 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp4cQ9D7F7 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp4cQ9D7F7 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp4cQ9D7F7 Gm18737-201ENSMUST00000173594 937 ntBASIC16.55■□□□□ 0.24
Chmp4cQ9D7F7 Gm24513-201ENSMUST00000174964 138 ntBASIC16.55■□□□□ 0.24
Chmp4cQ9D7F7 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp4cQ9D7F7 AC132104.2-201ENSMUST00000215011 266 ntBASIC16.55■□□□□ 0.24
Chmp4cQ9D7F7 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp4cQ9D7F7 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC16.55■□□□□ 0.24
Chmp4cQ9D7F7 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp4cQ9D7F7 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp4cQ9D7F7 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms