Protein–RNA interactions for Protein: Q9CZQ6

Raet1e, Retinoic acid early-inducible protein 1-epsilon, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1eQ9CZQ6 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Raet1eQ9CZQ6 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Raet1eQ9CZQ6 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Raet1eQ9CZQ6 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Raet1eQ9CZQ6 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Raet1eQ9CZQ6 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Raet1eQ9CZQ6 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Raet1eQ9CZQ6 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Raet1eQ9CZQ6 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Raet1eQ9CZQ6 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Raet1eQ9CZQ6 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC12.16□□□□□ -0.46
Raet1eQ9CZQ6 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Raet1eQ9CZQ6 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Raet1eQ9CZQ6 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Raet1eQ9CZQ6 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Raet1eQ9CZQ6 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Raet1eQ9CZQ6 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.16□□□□□ -0.46
Raet1eQ9CZQ6 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Raet1eQ9CZQ6 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Raet1eQ9CZQ6 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Raet1eQ9CZQ6 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Raet1eQ9CZQ6 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Raet1eQ9CZQ6 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Raet1eQ9CZQ6 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC12.16□□□□□ -0.46
Raet1eQ9CZQ6 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Raet1eQ9CZQ6 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Raet1eQ9CZQ6 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Raet1eQ9CZQ6 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC12.16□□□□□ -0.46
Raet1eQ9CZQ6 Gm33142-201ENSMUST00000193913 867 ntBASIC12.16□□□□□ -0.46
Raet1eQ9CZQ6 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Raet1eQ9CZQ6 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Raet1eQ9CZQ6 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Raet1eQ9CZQ6 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Raet1eQ9CZQ6 AC131709.1-201ENSMUST00000224731 1180 ntBASIC12.16□□□□□ -0.46
Raet1eQ9CZQ6 AC139350.3-201ENSMUST00000226151 420 ntBASIC12.16□□□□□ -0.46
Raet1eQ9CZQ6 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Raet1eQ9CZQ6 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Raet1eQ9CZQ6 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Raet1eQ9CZQ6 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Raet1eQ9CZQ6 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Raet1eQ9CZQ6 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Raet1eQ9CZQ6 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Raet1eQ9CZQ6 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Raet1eQ9CZQ6 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Raet1eQ9CZQ6 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Raet1eQ9CZQ6 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Raet1eQ9CZQ6 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Raet1eQ9CZQ6 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Raet1eQ9CZQ6 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Raet1eQ9CZQ6 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Raet1eQ9CZQ6 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Raet1eQ9CZQ6 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Raet1eQ9CZQ6 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Raet1eQ9CZQ6 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Raet1eQ9CZQ6 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Raet1eQ9CZQ6 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Raet1eQ9CZQ6 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Raet1eQ9CZQ6 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Raet1eQ9CZQ6 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Raet1eQ9CZQ6 CT025626.1-201ENSMUST00000223735 1455 ntBASIC12.15□□□□□ -0.46
Raet1eQ9CZQ6 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Raet1eQ9CZQ6 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Raet1eQ9CZQ6 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
Raet1eQ9CZQ6 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.15□□□□□ -0.46
Raet1eQ9CZQ6 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC12.15□□□□□ -0.46
Raet1eQ9CZQ6 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Raet1eQ9CZQ6 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Raet1eQ9CZQ6 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.15□□□□□ -0.46
Raet1eQ9CZQ6 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Raet1eQ9CZQ6 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC12.15□□□□□ -0.46
Raet1eQ9CZQ6 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Raet1eQ9CZQ6 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC12.15□□□□□ -0.46
Raet1eQ9CZQ6 Gm3809-201ENSMUST00000180973 1006 ntBASIC12.15□□□□□ -0.46
Raet1eQ9CZQ6 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC12.15□□□□□ -0.46
Raet1eQ9CZQ6 Klk2-ps-201ENSMUST00000205342 571 ntBASIC12.15□□□□□ -0.46
Raet1eQ9CZQ6 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Raet1eQ9CZQ6 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Raet1eQ9CZQ6 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Raet1eQ9CZQ6 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Raet1eQ9CZQ6 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Raet1eQ9CZQ6 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Raet1eQ9CZQ6 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Raet1eQ9CZQ6 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Raet1eQ9CZQ6 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Raet1eQ9CZQ6 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.15□□□□□ -0.46
Raet1eQ9CZQ6 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Raet1eQ9CZQ6 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Raet1eQ9CZQ6 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Raet1eQ9CZQ6 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Raet1eQ9CZQ6 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Raet1eQ9CZQ6 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
Raet1eQ9CZQ6 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.15□□□□□ -0.47
Raet1eQ9CZQ6 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Raet1eQ9CZQ6 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Raet1eQ9CZQ6 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Raet1eQ9CZQ6 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Raet1eQ9CZQ6 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Raet1eQ9CZQ6 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Raet1eQ9CZQ6 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
Raet1eQ9CZQ6 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms