Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Gm3809-201ENSMUST00000180973 1006 ntBASIC14.27□□□□□ -0.13
Snf8Q9CZ28 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Snf8Q9CZ28 Gm43514-201ENSMUST00000198852 424 ntBASIC14.27□□□□□ -0.13
Snf8Q9CZ28 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC14.27□□□□□ -0.13
Snf8Q9CZ28 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Snf8Q9CZ28 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Snf8Q9CZ28 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Snf8Q9CZ28 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Snf8Q9CZ28 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Snf8Q9CZ28 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC14.27□□□□□ -0.13
Snf8Q9CZ28 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Snf8Q9CZ28 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Snf8Q9CZ28 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Snf8Q9CZ28 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Snf8Q9CZ28 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Snf8Q9CZ28 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Snf8Q9CZ28 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Snf8Q9CZ28 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Snf8Q9CZ28 Gm37795-201ENSMUST00000194216 2459 ntBASIC14.26□□□□□ -0.13
Snf8Q9CZ28 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Snf8Q9CZ28 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Snf8Q9CZ28 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Snf8Q9CZ28 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Snf8Q9CZ28 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Snf8Q9CZ28 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Snf8Q9CZ28 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Snf8Q9CZ28 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Snf8Q9CZ28 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Snf8Q9CZ28 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Snf8Q9CZ28 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Snf8Q9CZ28 Gm13823-201ENSMUST00000119930 345 ntBASIC14.26□□□□□ -0.13
Snf8Q9CZ28 Gm15467-201ENSMUST00000120582 445 ntBASIC14.26□□□□□ -0.13
Snf8Q9CZ28 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Snf8Q9CZ28 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC14.26□□□□□ -0.13
Snf8Q9CZ28 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC14.26□□□□□ -0.13
Snf8Q9CZ28 Mir3113-201ENSMUST00000175478 76 ntBASIC14.26□□□□□ -0.13
Snf8Q9CZ28 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC14.26□□□□□ -0.13
Snf8Q9CZ28 Gm45683-201ENSMUST00000210825 1247 ntBASIC14.26□□□□□ -0.13
Snf8Q9CZ28 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Snf8Q9CZ28 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Snf8Q9CZ28 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Snf8Q9CZ28 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Snf8Q9CZ28 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Snf8Q9CZ28 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Snf8Q9CZ28 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Snf8Q9CZ28 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Snf8Q9CZ28 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Snf8Q9CZ28 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Snf8Q9CZ28 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Snf8Q9CZ28 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Snf8Q9CZ28 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Snf8Q9CZ28 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Snf8Q9CZ28 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Snf8Q9CZ28 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Snf8Q9CZ28 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Snf8Q9CZ28 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Snf8Q9CZ28 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Snf8Q9CZ28 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Snf8Q9CZ28 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Snf8Q9CZ28 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Snf8Q9CZ28 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Snf8Q9CZ28 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Snf8Q9CZ28 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Snf8Q9CZ28 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Snf8Q9CZ28 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Snf8Q9CZ28 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Snf8Q9CZ28 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Snf8Q9CZ28 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.25□□□□□ -0.13
Snf8Q9CZ28 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Snf8Q9CZ28 Gm6222-201ENSMUST00000120787 396 ntBASIC14.25□□□□□ -0.13
Snf8Q9CZ28 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC14.25□□□□□ -0.13
Snf8Q9CZ28 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC14.25□□□□□ -0.13
Snf8Q9CZ28 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC14.25□□□□□ -0.13
Snf8Q9CZ28 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC14.25□□□□□ -0.13
Snf8Q9CZ28 Gm29741-201ENSMUST00000192667 421 ntBASIC14.25□□□□□ -0.13
Snf8Q9CZ28 Gm18057-201ENSMUST00000208220 503 ntBASIC14.25□□□□□ -0.13
Snf8Q9CZ28 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC14.25□□□□□ -0.13
Snf8Q9CZ28 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Snf8Q9CZ28 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC14.25□□□□□ -0.13
Snf8Q9CZ28 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Snf8Q9CZ28 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Snf8Q9CZ28 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Snf8Q9CZ28 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Snf8Q9CZ28 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Snf8Q9CZ28 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Snf8Q9CZ28 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Snf8Q9CZ28 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Snf8Q9CZ28 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Snf8Q9CZ28 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Snf8Q9CZ28 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Snf8Q9CZ28 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Snf8Q9CZ28 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Snf8Q9CZ28 Gm37644-201ENSMUST00000192190 2270 ntBASIC14.25□□□□□ -0.13
Snf8Q9CZ28 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Snf8Q9CZ28 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Snf8Q9CZ28 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Snf8Q9CZ28 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Snf8Q9CZ28 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Snf8Q9CZ28 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Snf8Q9CZ28 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms