Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Ssr1Q9CY50 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC15.07■□□□□ 0
Ssr1Q9CY50 AC164426.2-201ENSMUST00000225993 2492 ntBASIC15.07■□□□□ 0
Ssr1Q9CY50 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ssr1Q9CY50 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ssr1Q9CY50 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ssr1Q9CY50 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ssr1Q9CY50 Gm4913-201ENSMUST00000117075 1290 ntBASIC15.07■□□□□ 0
Ssr1Q9CY50 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC15.07■□□□□ 0
Ssr1Q9CY50 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Ssr1Q9CY50 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ssr1Q9CY50 Gm5264-201ENSMUST00000190584 848 ntBASIC15.07■□□□□ 0
Ssr1Q9CY50 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC15.07■□□□□ 0
Ssr1Q9CY50 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Ssr1Q9CY50 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ssr1Q9CY50 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC15.07■□□□□ 0
Ssr1Q9CY50 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Ssr1Q9CY50 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ssr1Q9CY50 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ssr1Q9CY50 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Ssr1Q9CY50 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ssr1Q9CY50 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ssr1Q9CY50 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ssr1Q9CY50 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ssr1Q9CY50 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ssr1Q9CY50 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ssr1Q9CY50 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC15.06■□□□□ 0
Ssr1Q9CY50 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ssr1Q9CY50 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ssr1Q9CY50 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ssr1Q9CY50 Gm42471-201ENSMUST00000201457 1865 ntBASIC15.06■□□□□ 0
Ssr1Q9CY50 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ssr1Q9CY50 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ssr1Q9CY50 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC15.06■□□□□ 0
Ssr1Q9CY50 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
Ssr1Q9CY50 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ssr1Q9CY50 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
Ssr1Q9CY50 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ssr1Q9CY50 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ssr1Q9CY50 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC15.06■□□□□ 0
Ssr1Q9CY50 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC15.06■□□□□ 0
Ssr1Q9CY50 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ssr1Q9CY50 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ssr1Q9CY50 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ssr1Q9CY50 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ssr1Q9CY50 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ssr1Q9CY50 Gm5763-201ENSMUST00000155951 1530 ntBASIC15.06■□□□□ 0
Ssr1Q9CY50 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ssr1Q9CY50 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ssr1Q9CY50 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC15.06■□□□□ 0
Ssr1Q9CY50 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Ssr1Q9CY50 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC15.06■□□□□ 0
Ssr1Q9CY50 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ssr1Q9CY50 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Ssr1Q9CY50 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC15.05■□□□□ 0
Ssr1Q9CY50 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Ssr1Q9CY50 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC15.05■□□□□ 0
Ssr1Q9CY50 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Ssr1Q9CY50 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ssr1Q9CY50 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ssr1Q9CY50 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ssr1Q9CY50 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Ssr1Q9CY50 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ssr1Q9CY50 Gm8000-201ENSMUST00000188378 592 ntBASIC15.05■□□□□ -0
Ssr1Q9CY50 Gm18057-201ENSMUST00000208220 503 ntBASIC15.05■□□□□ -0
Ssr1Q9CY50 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ssr1Q9CY50 AC155252.2-201ENSMUST00000226946 680 ntBASIC15.05■□□□□ -0
Ssr1Q9CY50 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ssr1Q9CY50 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ssr1Q9CY50 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ssr1Q9CY50 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC15.05■□□□□ -0
Ssr1Q9CY50 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Ssr1Q9CY50 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ssr1Q9CY50 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ssr1Q9CY50 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ssr1Q9CY50 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ssr1Q9CY50 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ssr1Q9CY50 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ssr1Q9CY50 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Ssr1Q9CY50 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC15.04■□□□□ -0
Ssr1Q9CY50 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ssr1Q9CY50 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Ssr1Q9CY50 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ssr1Q9CY50 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ssr1Q9CY50 Gm30238-201ENSMUST00000195528 2603 ntBASIC15.04■□□□□ -0
Ssr1Q9CY50 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Ssr1Q9CY50 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC15.04■□□□□ -0
Ssr1Q9CY50 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC15.04■□□□□ -0
Ssr1Q9CY50 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC15.04■□□□□ -0
Ssr1Q9CY50 H2af-ps-201ENSMUST00000119066 295 ntBASIC15.04■□□□□ -0
Ssr1Q9CY50 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC15.04■□□□□ -0
Ssr1Q9CY50 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ssr1Q9CY50 Gm11745-201ENSMUST00000121669 448 ntBASIC15.04■□□□□ -0
Ssr1Q9CY50 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC15.04■□□□□ -0
Ssr1Q9CY50 Gm18737-201ENSMUST00000173594 937 ntBASIC15.04■□□□□ -0
Ssr1Q9CY50 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC15.04■□□□□ -0
Ssr1Q9CY50 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC15.04■□□□□ -0
Ssr1Q9CY50 Gm38225-201ENSMUST00000194001 393 ntBASIC15.04■□□□□ -0
Ssr1Q9CY50 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Ssr1Q9CY50 AW822252-206ENSMUST00000208904 237 ntBASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms