Protein–RNA interactions for Protein: Q9CXK8

Nip7, 60S ribosome subunit biogenesis protein NIP7 homolog, mousemouse

Known RBP Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nip7Q9CXK8 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nip7Q9CXK8 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Nip7Q9CXK8 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nip7Q9CXK8 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nip7Q9CXK8 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nip7Q9CXK8 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nip7Q9CXK8 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Nip7Q9CXK8 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Nip7Q9CXK8 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nip7Q9CXK8 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC17.15■□□□□ 0.34
Nip7Q9CXK8 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC17.15■□□□□ 0.34
Nip7Q9CXK8 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nip7Q9CXK8 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nip7Q9CXK8 Gm1335-201ENSMUST00000121653 386 ntBASIC17.15■□□□□ 0.34
Nip7Q9CXK8 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Nip7Q9CXK8 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Nip7Q9CXK8 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC17.15■□□□□ 0.34
Nip7Q9CXK8 Gm4271-201ENSMUST00000174444 973 ntBASIC17.15■□□□□ 0.34
Nip7Q9CXK8 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC17.15■□□□□ 0.34
Nip7Q9CXK8 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC17.15■□□□□ 0.34
Nip7Q9CXK8 Gm19184-201ENSMUST00000196798 928 ntBASIC17.15■□□□□ 0.34
Nip7Q9CXK8 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Nip7Q9CXK8 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC17.15■□□□□ 0.34
Nip7Q9CXK8 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Nip7Q9CXK8 Gm18934-201ENSMUST00000216671 1044 ntBASIC17.15■□□□□ 0.34
Nip7Q9CXK8 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Nip7Q9CXK8 Gm9257-201ENSMUST00000221254 232 ntBASIC17.15■□□□□ 0.34
Nip7Q9CXK8 Gm9823-201ENSMUST00000051212 327 ntBASIC17.15■□□□□ 0.34
Nip7Q9CXK8 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC17.15■□□□□ 0.34
Nip7Q9CXK8 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nip7Q9CXK8 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nip7Q9CXK8 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Nip7Q9CXK8 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nip7Q9CXK8 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nip7Q9CXK8 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nip7Q9CXK8 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nip7Q9CXK8 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Nip7Q9CXK8 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Nip7Q9CXK8 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nip7Q9CXK8 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nip7Q9CXK8 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nip7Q9CXK8 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC17.15■□□□□ 0.34
Nip7Q9CXK8 Fbxl12-205ENSMUST00000140702 1555 ntBASIC17.15■□□□□ 0.34
Nip7Q9CXK8 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC17.15■□□□□ 0.34
Nip7Q9CXK8 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nip7Q9CXK8 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nip7Q9CXK8 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nip7Q9CXK8 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC17.14■□□□□ 0.33
Nip7Q9CXK8 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nip7Q9CXK8 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC17.14■□□□□ 0.33
Nip7Q9CXK8 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nip7Q9CXK8 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Nip7Q9CXK8 Gm8337-201ENSMUST00000187358 1938 ntBASIC17.14■□□□□ 0.33
Nip7Q9CXK8 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nip7Q9CXK8 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nip7Q9CXK8 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC17.14■□□□□ 0.33
Nip7Q9CXK8 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Nip7Q9CXK8 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Nip7Q9CXK8 Gm27682-201ENSMUST00000183930 110 ntBASIC17.14■□□□□ 0.33
Nip7Q9CXK8 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Nip7Q9CXK8 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC17.14■□□□□ 0.33
Nip7Q9CXK8 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Nip7Q9CXK8 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC17.14■□□□□ 0.33
Nip7Q9CXK8 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nip7Q9CXK8 Rn7sk-201ENSMUST00000083103 331 ntBASIC17.14■□□□□ 0.33
Nip7Q9CXK8 Gm26315-201ENSMUST00000083890 321 ntBASIC17.14■□□□□ 0.33
Nip7Q9CXK8 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nip7Q9CXK8 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nip7Q9CXK8 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Nip7Q9CXK8 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC17.14■□□□□ 0.33
Nip7Q9CXK8 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC17.14■□□□□ 0.33
Nip7Q9CXK8 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC17.14■□□□□ 0.33
Nip7Q9CXK8 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nip7Q9CXK8 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC17.13■□□□□ 0.33
Nip7Q9CXK8 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nip7Q9CXK8 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nip7Q9CXK8 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nip7Q9CXK8 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nip7Q9CXK8 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nip7Q9CXK8 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nip7Q9CXK8 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nip7Q9CXK8 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nip7Q9CXK8 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nip7Q9CXK8 Gm8801-201ENSMUST00000173255 1064 ntBASIC17.13■□□□□ 0.33
Nip7Q9CXK8 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nip7Q9CXK8 Gm7172-201ENSMUST00000218047 1152 ntBASIC17.13■□□□□ 0.33
Nip7Q9CXK8 Gm19309-201ENSMUST00000218295 205 ntBASIC17.13■□□□□ 0.33
Nip7Q9CXK8 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nip7Q9CXK8 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nip7Q9CXK8 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Nip7Q9CXK8 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nip7Q9CXK8 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nip7Q9CXK8 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Nip7Q9CXK8 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nip7Q9CXK8 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nip7Q9CXK8 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Nip7Q9CXK8 Gm9755-201ENSMUST00000032981 1356 ntBASIC17.13■□□□□ 0.33
Nip7Q9CXK8 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nip7Q9CXK8 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nip7Q9CXK8 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms