Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.59□□□□□ -0.23
Trim8Q99PJ2 Gm45683-201ENSMUST00000210825 1247 ntBASIC13.59□□□□□ -0.23
Trim8Q99PJ2 CT943659.1-201ENSMUST00000215459 326 ntBASIC13.59□□□□□ -0.23
Trim8Q99PJ2 AC174742.1-201ENSMUST00000218272 304 ntBASIC13.59□□□□□ -0.23
Trim8Q99PJ2 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.59□□□□□ -0.23
Trim8Q99PJ2 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim8Q99PJ2 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim8Q99PJ2 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Trim8Q99PJ2 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim8Q99PJ2 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim8Q99PJ2 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Trim8Q99PJ2 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim8Q99PJ2 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim8Q99PJ2 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim8Q99PJ2 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim8Q99PJ2 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim8Q99PJ2 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim8Q99PJ2 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim8Q99PJ2 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim8Q99PJ2 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim8Q99PJ2 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
Trim8Q99PJ2 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC13.58□□□□□ -0.23
Trim8Q99PJ2 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trim8Q99PJ2 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trim8Q99PJ2 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trim8Q99PJ2 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim8Q99PJ2 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim8Q99PJ2 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.58□□□□□ -0.24
Trim8Q99PJ2 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trim8Q99PJ2 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Trim8Q99PJ2 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Trim8Q99PJ2 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim8Q99PJ2 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC13.58□□□□□ -0.24
Trim8Q99PJ2 Ighv8-7-201ENSMUST00000194349 297 ntBASIC13.58□□□□□ -0.24
Trim8Q99PJ2 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trim8Q99PJ2 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim8Q99PJ2 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim8Q99PJ2 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
Trim8Q99PJ2 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim8Q99PJ2 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.58□□□□□ -0.24
Trim8Q99PJ2 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim8Q99PJ2 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Trim8Q99PJ2 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Trim8Q99PJ2 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Trim8Q99PJ2 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim8Q99PJ2 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim8Q99PJ2 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim8Q99PJ2 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim8Q99PJ2 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim8Q99PJ2 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim8Q99PJ2 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.57□□□□□ -0.24
Trim8Q99PJ2 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.57□□□□□ -0.24
Trim8Q99PJ2 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.57□□□□□ -0.24
Trim8Q99PJ2 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim8Q99PJ2 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trim8Q99PJ2 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Trim8Q99PJ2 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Trim8Q99PJ2 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.57□□□□□ -0.24
Trim8Q99PJ2 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.57□□□□□ -0.24
Trim8Q99PJ2 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trim8Q99PJ2 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim8Q99PJ2 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim8Q99PJ2 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim8Q99PJ2 Gm4995-201ENSMUST00000117247 432 ntBASIC13.57□□□□□ -0.24
Trim8Q99PJ2 Gm12882-201ENSMUST00000121696 517 ntBASIC13.57□□□□□ -0.24
Trim8Q99PJ2 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim8Q99PJ2 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.57□□□□□ -0.24
Trim8Q99PJ2 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.57□□□□□ -0.24
Trim8Q99PJ2 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC13.57□□□□□ -0.24
Trim8Q99PJ2 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.57□□□□□ -0.24
Trim8Q99PJ2 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim8Q99PJ2 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim8Q99PJ2 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim8Q99PJ2 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim8Q99PJ2 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim8Q99PJ2 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Trim8Q99PJ2 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim8Q99PJ2 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim8Q99PJ2 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim8Q99PJ2 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.57□□□□□ -0.24
Trim8Q99PJ2 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trim8Q99PJ2 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim8Q99PJ2 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim8Q99PJ2 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim8Q99PJ2 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim8Q99PJ2 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Trim8Q99PJ2 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim8Q99PJ2 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim8Q99PJ2 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trim8Q99PJ2 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim8Q99PJ2 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trim8Q99PJ2 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Trim8Q99PJ2 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim8Q99PJ2 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC13.56□□□□□ -0.24
Trim8Q99PJ2 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim8Q99PJ2 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim8Q99PJ2 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trim8Q99PJ2 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim8Q99PJ2 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trim8Q99PJ2 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms