Protein–RNA interactions for Protein: Q99PE5

Smim3, Small integral membrane protein 3, mousemouse

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim3Q99PE5 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smim3Q99PE5 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Smim3Q99PE5 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smim3Q99PE5 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Smim3Q99PE5 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Smim3Q99PE5 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Smim3Q99PE5 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smim3Q99PE5 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Smim3Q99PE5 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smim3Q99PE5 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smim3Q99PE5 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smim3Q99PE5 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Smim3Q99PE5 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Smim3Q99PE5 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smim3Q99PE5 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smim3Q99PE5 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smim3Q99PE5 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Smim3Q99PE5 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Smim3Q99PE5 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC11.78□□□□□ -0.52
Smim3Q99PE5 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smim3Q99PE5 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Smim3Q99PE5 Gm37500-201ENSMUST00000192059 1443 ntBASIC11.78□□□□□ -0.52
Smim3Q99PE5 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smim3Q99PE5 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Smim3Q99PE5 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smim3Q99PE5 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smim3Q99PE5 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Smim3Q99PE5 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Smim3Q99PE5 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smim3Q99PE5 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smim3Q99PE5 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Smim3Q99PE5 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smim3Q99PE5 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smim3Q99PE5 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smim3Q99PE5 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smim3Q99PE5 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC11.78□□□□□ -0.52
Smim3Q99PE5 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smim3Q99PE5 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smim3Q99PE5 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smim3Q99PE5 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smim3Q99PE5 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Smim3Q99PE5 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Smim3Q99PE5 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Smim3Q99PE5 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smim3Q99PE5 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smim3Q99PE5 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Smim3Q99PE5 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC11.78□□□□□ -0.52
Smim3Q99PE5 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC11.78□□□□□ -0.52
Smim3Q99PE5 Gm43935-201ENSMUST00000203569 1050 ntBASIC11.78□□□□□ -0.52
Smim3Q99PE5 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smim3Q99PE5 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC11.78□□□□□ -0.52
Smim3Q99PE5 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smim3Q99PE5 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smim3Q99PE5 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smim3Q99PE5 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smim3Q99PE5 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC11.78□□□□□ -0.52
Smim3Q99PE5 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smim3Q99PE5 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Smim3Q99PE5 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Smim3Q99PE5 AC119177.1-201ENSMUST00000227647 1332 ntBASIC11.78□□□□□ -0.52
Smim3Q99PE5 Gm45242-201ENSMUST00000210666 2129 ntBASIC11.78□□□□□ -0.52
Smim3Q99PE5 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smim3Q99PE5 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Smim3Q99PE5 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Smim3Q99PE5 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Smim3Q99PE5 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Smim3Q99PE5 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Smim3Q99PE5 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Smim3Q99PE5 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Smim3Q99PE5 Gm27194-201ENSMUST00000175753 2936 ntBASIC11.77□□□□□ -0.52
Smim3Q99PE5 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC11.77□□□□□ -0.52
Smim3Q99PE5 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Smim3Q99PE5 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Smim3Q99PE5 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Smim3Q99PE5 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smim3Q99PE5 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Smim3Q99PE5 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smim3Q99PE5 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smim3Q99PE5 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Smim3Q99PE5 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smim3Q99PE5 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC11.77□□□□□ -0.53
Smim3Q99PE5 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Smim3Q99PE5 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Smim3Q99PE5 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC11.77□□□□□ -0.53
Smim3Q99PE5 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Smim3Q99PE5 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Smim3Q99PE5 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Smim3Q99PE5 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Smim3Q99PE5 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smim3Q99PE5 Gm9347-201ENSMUST00000211473 1607 ntBASIC11.77□□□□□ -0.53
Smim3Q99PE5 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smim3Q99PE5 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smim3Q99PE5 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smim3Q99PE5 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Smim3Q99PE5 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smim3Q99PE5 Gm45743-201ENSMUST00000212701 2795 ntBASIC11.77□□□□□ -0.53
Smim3Q99PE5 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smim3Q99PE5 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Smim3Q99PE5 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smim3Q99PE5 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms