Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx6-1Q99MA9 Gm42550-201ENSMUST00000201553 960 ntBASIC12.97□□□□□ -0.33
Nkx6-1Q99MA9 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.97□□□□□ -0.33
Nkx6-1Q99MA9 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Nkx6-1Q99MA9 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx6-1Q99MA9 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx6-1Q99MA9 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx6-1Q99MA9 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx6-1Q99MA9 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx6-1Q99MA9 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx6-1Q99MA9 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx6-1Q99MA9 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx6-1Q99MA9 Gm10676-201ENSMUST00000098778 3221 ntBASIC12.97□□□□□ -0.33
Nkx6-1Q99MA9 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx6-1Q99MA9 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Nkx6-1Q99MA9 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx6-1Q99MA9 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx6-1Q99MA9 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx6-1Q99MA9 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx6-1Q99MA9 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC12.96□□□□□ -0.33
Nkx6-1Q99MA9 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx6-1Q99MA9 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx6-1Q99MA9 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Nkx6-1Q99MA9 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC12.96□□□□□ -0.33
Nkx6-1Q99MA9 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx6-1Q99MA9 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx6-1Q99MA9 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx6-1Q99MA9 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Nkx6-1Q99MA9 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx6-1Q99MA9 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx6-1Q99MA9 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx6-1Q99MA9 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx6-1Q99MA9 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx6-1Q99MA9 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx6-1Q99MA9 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx6-1Q99MA9 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx6-1Q99MA9 Gm13342-201ENSMUST00000121055 207 ntBASIC12.96□□□□□ -0.33
Nkx6-1Q99MA9 Gm11434-201ENSMUST00000122379 629 ntBASIC12.96□□□□□ -0.33
Nkx6-1Q99MA9 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC12.96□□□□□ -0.33
Nkx6-1Q99MA9 Gm6152-201ENSMUST00000151704 340 ntBASIC12.96□□□□□ -0.33
Nkx6-1Q99MA9 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.96□□□□□ -0.33
Nkx6-1Q99MA9 Mir3547-201ENSMUST00000175461 88 ntBASIC12.96□□□□□ -0.33
Nkx6-1Q99MA9 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Nkx6-1Q99MA9 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.96□□□□□ -0.33
Nkx6-1Q99MA9 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.96□□□□□ -0.33
Nkx6-1Q99MA9 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC12.96□□□□□ -0.33
Nkx6-1Q99MA9 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx6-1Q99MA9 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC12.96□□□□□ -0.33
Nkx6-1Q99MA9 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
Nkx6-1Q99MA9 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.96□□□□□ -0.33
Nkx6-1Q99MA9 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx6-1Q99MA9 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx6-1Q99MA9 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx6-1Q99MA9 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nkx6-1Q99MA9 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Nkx6-1Q99MA9 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Nkx6-1Q99MA9 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nkx6-1Q99MA9 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nkx6-1Q99MA9 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx6-1Q99MA9 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx6-1Q99MA9 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx6-1Q99MA9 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx6-1Q99MA9 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx6-1Q99MA9 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx6-1Q99MA9 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx6-1Q99MA9 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx6-1Q99MA9 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Nkx6-1Q99MA9 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx6-1Q99MA9 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx6-1Q99MA9 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx6-1Q99MA9 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.95□□□□□ -0.34
Nkx6-1Q99MA9 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx6-1Q99MA9 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx6-1Q99MA9 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC12.95□□□□□ -0.34
Nkx6-1Q99MA9 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Nkx6-1Q99MA9 Gm22018-201ENSMUST00000104357 131 ntBASIC12.95□□□□□ -0.34
Nkx6-1Q99MA9 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx6-1Q99MA9 Rn7s1-201ENSMUST00000174924 300 ntBASIC12.95□□□□□ -0.34
Nkx6-1Q99MA9 Rn7s2-201ENSMUST00000175032 300 ntBASIC12.95□□□□□ -0.34
Nkx6-1Q99MA9 Gm26461-201ENSMUST00000175064 290 ntBASIC12.95□□□□□ -0.34
Nkx6-1Q99MA9 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC12.95□□□□□ -0.34
Nkx6-1Q99MA9 Proscos-202ENSMUST00000178990 666 ntBASIC12.95□□□□□ -0.34
Nkx6-1Q99MA9 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx6-1Q99MA9 Gm29199-201ENSMUST00000187766 775 ntBASIC12.95□□□□□ -0.34
Nkx6-1Q99MA9 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.95□□□□□ -0.34
Nkx6-1Q99MA9 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC12.95□□□□□ -0.34
Nkx6-1Q99MA9 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx6-1Q99MA9 AC093022.1-201ENSMUST00000226949 1072 ntBASIC12.95□□□□□ -0.34
Nkx6-1Q99MA9 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx6-1Q99MA9 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12.95□□□□□ -0.34
Nkx6-1Q99MA9 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx6-1Q99MA9 Gm42632-201ENSMUST00000201707 2411 ntBASIC12.95□□□□□ -0.34
Nkx6-1Q99MA9 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC12.95□□□□□ -0.34
Nkx6-1Q99MA9 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx6-1Q99MA9 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx6-1Q99MA9 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx6-1Q99MA9 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Nkx6-1Q99MA9 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Nkx6-1Q99MA9 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx6-1Q99MA9 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms