Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scrt1Q99M85 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scrt1Q99M85 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scrt1Q99M85 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Scrt1Q99M85 Gm14452-201ENSMUST00000118680 1632 ntBASIC12.16□□□□□ -0.46
Scrt1Q99M85 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scrt1Q99M85 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Scrt1Q99M85 Gm13226-201ENSMUST00000117838 404 ntBASIC12.16□□□□□ -0.46
Scrt1Q99M85 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.16□□□□□ -0.46
Scrt1Q99M85 AA619741-201ENSMUST00000195095 646 ntBASIC12.16□□□□□ -0.46
Scrt1Q99M85 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.16□□□□□ -0.46
Scrt1Q99M85 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scrt1Q99M85 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scrt1Q99M85 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scrt1Q99M85 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.16□□□□□ -0.46
Scrt1Q99M85 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC12.16□□□□□ -0.46
Scrt1Q99M85 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scrt1Q99M85 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scrt1Q99M85 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scrt1Q99M85 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scrt1Q99M85 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scrt1Q99M85 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scrt1Q99M85 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scrt1Q99M85 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Scrt1Q99M85 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scrt1Q99M85 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Scrt1Q99M85 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Scrt1Q99M85 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Scrt1Q99M85 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Scrt1Q99M85 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC12.15□□□□□ -0.46
Scrt1Q99M85 AC148324.1-201ENSMUST00000219034 4240 ntBASIC12.15□□□□□ -0.46
Scrt1Q99M85 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Scrt1Q99M85 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Scrt1Q99M85 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Scrt1Q99M85 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Scrt1Q99M85 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Scrt1Q99M85 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Scrt1Q99M85 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Scrt1Q99M85 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.15□□□□□ -0.46
Scrt1Q99M85 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.15□□□□□ -0.46
Scrt1Q99M85 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.15□□□□□ -0.46
Scrt1Q99M85 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Scrt1Q99M85 Trav13-3-201ENSMUST00000117226 336 ntBASIC12.15□□□□□ -0.46
Scrt1Q99M85 Gm15198-201ENSMUST00000117283 177 ntBASIC12.15□□□□□ -0.46
Scrt1Q99M85 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
Scrt1Q99M85 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.15□□□□□ -0.46
Scrt1Q99M85 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Scrt1Q99M85 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Scrt1Q99M85 Gm18307-201ENSMUST00000206864 949 ntBASIC12.15□□□□□ -0.46
Scrt1Q99M85 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.15□□□□□ -0.46
Scrt1Q99M85 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Scrt1Q99M85 Gm10478-201ENSMUST00000084451 396 ntBASIC12.15□□□□□ -0.46
Scrt1Q99M85 BC001981-202ENSMUST00000191393 1545 ntBASIC12.15□□□□□ -0.46
Scrt1Q99M85 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Scrt1Q99M85 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Scrt1Q99M85 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC12.15□□□□□ -0.46
Scrt1Q99M85 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Scrt1Q99M85 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Scrt1Q99M85 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Scrt1Q99M85 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Scrt1Q99M85 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Scrt1Q99M85 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Scrt1Q99M85 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC12.14□□□□□ -0.47
Scrt1Q99M85 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.14□□□□□ -0.47
Scrt1Q99M85 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.14□□□□□ -0.47
Scrt1Q99M85 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scrt1Q99M85 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Scrt1Q99M85 Gm11661-201ENSMUST00000121761 1327 ntBASIC12.14□□□□□ -0.47
Scrt1Q99M85 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Scrt1Q99M85 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scrt1Q99M85 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scrt1Q99M85 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scrt1Q99M85 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scrt1Q99M85 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Scrt1Q99M85 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scrt1Q99M85 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.14□□□□□ -0.47
Scrt1Q99M85 Gm17420-201ENSMUST00000164753 153 ntBASIC12.14□□□□□ -0.47
Scrt1Q99M85 Gm5279-201ENSMUST00000199575 745 ntBASIC12.14□□□□□ -0.47
Scrt1Q99M85 Olfr286-202ENSMUST00000205305 969 ntBASIC12.14□□□□□ -0.47
Scrt1Q99M85 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC12.14□□□□□ -0.47
Scrt1Q99M85 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.14□□□□□ -0.47
Scrt1Q99M85 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scrt1Q99M85 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scrt1Q99M85 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Scrt1Q99M85 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scrt1Q99M85 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Scrt1Q99M85 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scrt1Q99M85 Mxra8os-201ENSMUST00000097740 687 ntBASIC12.14□□□□□ -0.47
Scrt1Q99M85 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC12.14□□□□□ -0.47
Scrt1Q99M85 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scrt1Q99M85 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.14□□□□□ -0.47
Scrt1Q99M85 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Scrt1Q99M85 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC12.14□□□□□ -0.47
Scrt1Q99M85 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scrt1Q99M85 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scrt1Q99M85 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scrt1Q99M85 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scrt1Q99M85 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scrt1Q99M85 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Scrt1Q99M85 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms