Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atf7Q8R0S1 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atf7Q8R0S1 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atf7Q8R0S1 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atf7Q8R0S1 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Atf7Q8R0S1 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Atf7Q8R0S1 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Atf7Q8R0S1 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC16.36■□□□□ 0.21
Atf7Q8R0S1 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
Atf7Q8R0S1 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Atf7Q8R0S1 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Atf7Q8R0S1 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atf7Q8R0S1 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Atf7Q8R0S1 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC16.36■□□□□ 0.21
Atf7Q8R0S1 Gm27306-201ENSMUST00000183970 107 ntBASIC16.36■□□□□ 0.21
Atf7Q8R0S1 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC16.36■□□□□ 0.21
Atf7Q8R0S1 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC16.36■□□□□ 0.21
Atf7Q8R0S1 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atf7Q8R0S1 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC16.36■□□□□ 0.21
Atf7Q8R0S1 Gm5867-201ENSMUST00000063197 592 ntBASIC16.36■□□□□ 0.21
Atf7Q8R0S1 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC16.36■□□□□ 0.21
Atf7Q8R0S1 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atf7Q8R0S1 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Atf7Q8R0S1 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atf7Q8R0S1 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Atf7Q8R0S1 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atf7Q8R0S1 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atf7Q8R0S1 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Atf7Q8R0S1 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Atf7Q8R0S1 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC16.35■□□□□ 0.21
Atf7Q8R0S1 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Atf7Q8R0S1 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Atf7Q8R0S1 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Atf7Q8R0S1 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Atf7Q8R0S1 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Atf7Q8R0S1 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Atf7Q8R0S1 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Atf7Q8R0S1 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Atf7Q8R0S1 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Atf7Q8R0S1 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Atf7Q8R0S1 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Atf7Q8R0S1 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Atf7Q8R0S1 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
Atf7Q8R0S1 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Atf7Q8R0S1 Gm4875-201ENSMUST00000118257 786 ntBASIC16.35■□□□□ 0.21
Atf7Q8R0S1 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC16.35■□□□□ 0.21
Atf7Q8R0S1 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Atf7Q8R0S1 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Atf7Q8R0S1 Gm5425-201ENSMUST00000214125 459 ntBASIC16.35■□□□□ 0.21
Atf7Q8R0S1 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Atf7Q8R0S1 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Atf7Q8R0S1 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Atf7Q8R0S1 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Atf7Q8R0S1 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Atf7Q8R0S1 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC16.35■□□□□ 0.21
Atf7Q8R0S1 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Atf7Q8R0S1 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Atf7Q8R0S1 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Atf7Q8R0S1 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Atf7Q8R0S1 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Atf7Q8R0S1 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Atf7Q8R0S1 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Atf7Q8R0S1 Matn2-206ENSMUST00000228570 2798 ntBASIC16.34■□□□□ 0.21
Atf7Q8R0S1 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Atf7Q8R0S1 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Atf7Q8R0S1 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC16.34■□□□□ 0.21
Atf7Q8R0S1 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC16.34■□□□□ 0.21
Atf7Q8R0S1 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Atf7Q8R0S1 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Atf7Q8R0S1 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC16.34■□□□□ 0.21
Atf7Q8R0S1 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC16.34■□□□□ 0.21
Atf7Q8R0S1 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Atf7Q8R0S1 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Atf7Q8R0S1 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Atf7Q8R0S1 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Atf7Q8R0S1 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
Atf7Q8R0S1 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Atf7Q8R0S1 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Atf7Q8R0S1 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Atf7Q8R0S1 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Atf7Q8R0S1 Gm10729-202ENSMUST00000193403 1375 ntBASIC16.34■□□□□ 0.21
Atf7Q8R0S1 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC16.34■□□□□ 0.21
Atf7Q8R0S1 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Atf7Q8R0S1 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Atf7Q8R0S1 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Atf7Q8R0S1 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Atf7Q8R0S1 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Atf7Q8R0S1 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.21
Atf7Q8R0S1 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Atf7Q8R0S1 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Atf7Q8R0S1 Gm4204-201ENSMUST00000110798 1231 ntBASIC16.33■□□□□ 0.2
Atf7Q8R0S1 Gm6912-201ENSMUST00000117218 544 ntBASIC16.33■□□□□ 0.2
Atf7Q8R0S1 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC16.33■□□□□ 0.2
Atf7Q8R0S1 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Atf7Q8R0S1 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Atf7Q8R0S1 Gm7390-201ENSMUST00000212452 1216 ntBASIC16.33■□□□□ 0.2
Atf7Q8R0S1 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC16.33■□□□□ 0.2
Atf7Q8R0S1 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC16.33■□□□□ 0.2
Atf7Q8R0S1 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Atf7Q8R0S1 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms