Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
Ddx54Q8K4L0 Gm5523-201ENSMUST00000180415 997 ntBASIC18■□□□□ 0.47
Ddx54Q8K4L0 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC18■□□□□ 0.47
Ddx54Q8K4L0 Morn2-202ENSMUST00000227729 656 ntBASIC18■□□□□ 0.47
Ddx54Q8K4L0 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ddx54Q8K4L0 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ddx54Q8K4L0 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ddx54Q8K4L0 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ddx54Q8K4L0 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ddx54Q8K4L0 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ddx54Q8K4L0 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC18■□□□□ 0.47
Ddx54Q8K4L0 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
Ddx54Q8K4L0 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC18■□□□□ 0.47
Ddx54Q8K4L0 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ddx54Q8K4L0 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Ddx54Q8K4L0 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Ddx54Q8K4L0 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ddx54Q8K4L0 Gm10040-201ENSMUST00000080726 1662 ntBASIC17.99■□□□□ 0.47
Ddx54Q8K4L0 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ddx54Q8K4L0 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ddx54Q8K4L0 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC17.99■□□□□ 0.47
Ddx54Q8K4L0 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ddx54Q8K4L0 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ddx54Q8K4L0 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.99■□□□□ 0.47
Ddx54Q8K4L0 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ddx54Q8K4L0 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
Ddx54Q8K4L0 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ddx54Q8K4L0 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Ddx54Q8K4L0 Gm11964-201ENSMUST00000120982 444 ntBASIC17.99■□□□□ 0.47
Ddx54Q8K4L0 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
Ddx54Q8K4L0 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC17.99■□□□□ 0.47
Ddx54Q8K4L0 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC17.99■□□□□ 0.47
Ddx54Q8K4L0 Gm34767-201ENSMUST00000191813 1062 ntBASIC17.99■□□□□ 0.47
Ddx54Q8K4L0 Gm38144-201ENSMUST00000192790 465 ntBASIC17.99■□□□□ 0.47
Ddx54Q8K4L0 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC17.99■□□□□ 0.47
Ddx54Q8K4L0 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC17.99■□□□□ 0.47
Ddx54Q8K4L0 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC17.99■□□□□ 0.47
Ddx54Q8K4L0 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ddx54Q8K4L0 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ddx54Q8K4L0 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ddx54Q8K4L0 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC17.99■□□□□ 0.47
Ddx54Q8K4L0 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC17.98■□□□□ 0.47
Ddx54Q8K4L0 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx54Q8K4L0 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx54Q8K4L0 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx54Q8K4L0 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx54Q8K4L0 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Ddx54Q8K4L0 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx54Q8K4L0 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx54Q8K4L0 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
Ddx54Q8K4L0 Gm14277-201ENSMUST00000121195 360 ntBASIC17.98■□□□□ 0.47
Ddx54Q8K4L0 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx54Q8K4L0 Gm3809-201ENSMUST00000180973 1006 ntBASIC17.98■□□□□ 0.47
Ddx54Q8K4L0 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC17.98■□□□□ 0.47
Ddx54Q8K4L0 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC17.98■□□□□ 0.47
Ddx54Q8K4L0 Gm19208-201ENSMUST00000213861 912 ntBASIC17.98■□□□□ 0.47
Ddx54Q8K4L0 AC154595.3-201ENSMUST00000224579 384 ntBASIC17.98■□□□□ 0.47
Ddx54Q8K4L0 Gm9826-201ENSMUST00000029124 1299 ntBASIC17.98■□□□□ 0.47
Ddx54Q8K4L0 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx54Q8K4L0 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Ddx54Q8K4L0 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC17.98■□□□□ 0.47
Ddx54Q8K4L0 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx54Q8K4L0 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx54Q8K4L0 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx54Q8K4L0 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx54Q8K4L0 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx54Q8K4L0 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx54Q8K4L0 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Ddx54Q8K4L0 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx54Q8K4L0 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx54Q8K4L0 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Ddx54Q8K4L0 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx54Q8K4L0 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx54Q8K4L0 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx54Q8K4L0 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx54Q8K4L0 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx54Q8K4L0 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Ddx54Q8K4L0 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ddx54Q8K4L0 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ddx54Q8K4L0 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC17.97■□□□□ 0.47
Ddx54Q8K4L0 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC17.97■□□□□ 0.47
Ddx54Q8K4L0 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ddx54Q8K4L0 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
Ddx54Q8K4L0 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
Ddx54Q8K4L0 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
Ddx54Q8K4L0 Gm8805-201ENSMUST00000117848 313 ntBASIC17.97■□□□□ 0.47
Ddx54Q8K4L0 Gm12012-201ENSMUST00000118857 1066 ntBASIC17.97■□□□□ 0.47
Ddx54Q8K4L0 Gm11222-201ENSMUST00000119005 738 ntBASIC17.97■□□□□ 0.47
Ddx54Q8K4L0 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC17.97■□□□□ 0.47
Ddx54Q8K4L0 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
Ddx54Q8K4L0 Gm17330-201ENSMUST00000221047 165 ntBASIC17.97■□□□□ 0.47
Ddx54Q8K4L0 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ddx54Q8K4L0 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Ddx54Q8K4L0 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ddx54Q8K4L0 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ddx54Q8K4L0 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Ddx54Q8K4L0 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ddx54Q8K4L0 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ddx54Q8K4L0 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ddx54Q8K4L0 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms