Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rtn1Q8K0T0 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Rtn1Q8K0T0 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rtn1Q8K0T0 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Rtn1Q8K0T0 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Rtn1Q8K0T0 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16■□□□□ 0.15
Rtn1Q8K0T0 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
Rtn1Q8K0T0 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Rtn1Q8K0T0 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Rtn1Q8K0T0 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rtn1Q8K0T0 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rtn1Q8K0T0 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Rtn1Q8K0T0 Syt7-204ENSMUST00000223586 1344 ntBASIC15.99■□□□□ 0.15
Rtn1Q8K0T0 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rtn1Q8K0T0 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rtn1Q8K0T0 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Rtn1Q8K0T0 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rtn1Q8K0T0 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rtn1Q8K0T0 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rtn1Q8K0T0 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rtn1Q8K0T0 Gm14452-201ENSMUST00000118680 1632 ntBASIC15.99■□□□□ 0.15
Rtn1Q8K0T0 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rtn1Q8K0T0 Gm6912-201ENSMUST00000117218 544 ntBASIC15.99■□□□□ 0.15
Rtn1Q8K0T0 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC15.99■□□□□ 0.15
Rtn1Q8K0T0 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC15.99■□□□□ 0.15
Rtn1Q8K0T0 Gm24694-201ENSMUST00000180054 110 ntBASIC15.99■□□□□ 0.15
Rtn1Q8K0T0 Gm27663-201ENSMUST00000184839 110 ntBASIC15.99■□□□□ 0.15
Rtn1Q8K0T0 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rtn1Q8K0T0 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Rtn1Q8K0T0 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Rtn1Q8K0T0 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rtn1Q8K0T0 Gm38391-201ENSMUST00000191720 4069 ntBASIC15.99■□□□□ 0.15
Rtn1Q8K0T0 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rtn1Q8K0T0 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC15.99■□□□□ 0.15
Rtn1Q8K0T0 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rtn1Q8K0T0 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC15.99■□□□□ 0.15
Rtn1Q8K0T0 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rtn1Q8K0T0 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC15.99■□□□□ 0.15
Rtn1Q8K0T0 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rtn1Q8K0T0 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rtn1Q8K0T0 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rtn1Q8K0T0 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Rtn1Q8K0T0 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rtn1Q8K0T0 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rtn1Q8K0T0 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rtn1Q8K0T0 Gm42690-201ENSMUST00000197921 1836 ntBASIC15.98■□□□□ 0.15
Rtn1Q8K0T0 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Rtn1Q8K0T0 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC15.98■□□□□ 0.15
Rtn1Q8K0T0 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC15.98■□□□□ 0.15
Rtn1Q8K0T0 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rtn1Q8K0T0 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rtn1Q8K0T0 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Rtn1Q8K0T0 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rtn1Q8K0T0 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC15.98■□□□□ 0.15
Rtn1Q8K0T0 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Rtn1Q8K0T0 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rtn1Q8K0T0 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Rtn1Q8K0T0 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rtn1Q8K0T0 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rtn1Q8K0T0 Gm15240-201ENSMUST00000118156 720 ntBASIC15.98■□□□□ 0.15
Rtn1Q8K0T0 Gm15321-201ENSMUST00000121290 288 ntBASIC15.98■□□□□ 0.15
Rtn1Q8K0T0 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rtn1Q8K0T0 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Rtn1Q8K0T0 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rtn1Q8K0T0 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rtn1Q8K0T0 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rtn1Q8K0T0 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rtn1Q8K0T0 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Rtn1Q8K0T0 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Rtn1Q8K0T0 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC15.98■□□□□ 0.15
Rtn1Q8K0T0 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Rtn1Q8K0T0 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rtn1Q8K0T0 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Rtn1Q8K0T0 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rtn1Q8K0T0 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Rtn1Q8K0T0 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Rtn1Q8K0T0 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC15.98■□□□□ 0.15
Rtn1Q8K0T0 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rtn1Q8K0T0 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rtn1Q8K0T0 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rtn1Q8K0T0 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Rtn1Q8K0T0 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rtn1Q8K0T0 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC15.97■□□□□ 0.15
Rtn1Q8K0T0 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC15.97■□□□□ 0.15
Rtn1Q8K0T0 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Rtn1Q8K0T0 Gm21854-201ENSMUST00000179901 471 ntBASIC15.97■□□□□ 0.15
Rtn1Q8K0T0 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Rtn1Q8K0T0 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC15.97■□□□□ 0.15
Rtn1Q8K0T0 AC165157.4-201ENSMUST00000220587 139 ntBASIC15.97■□□□□ 0.15
Rtn1Q8K0T0 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rtn1Q8K0T0 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Rtn1Q8K0T0 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Rtn1Q8K0T0 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rtn1Q8K0T0 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rtn1Q8K0T0 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Rtn1Q8K0T0 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rtn1Q8K0T0 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rtn1Q8K0T0 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rtn1Q8K0T0 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rtn1Q8K0T0 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms